Transcript Information: R_Transcript_420169.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57040502983496
Replicate 20.65613438800932
Replicate 30.23861184995992
Condition 2: 8 Hour
Replicate 10.76518327960141
Replicate 20.4658517050247
Replicate 30.3781585545914
Condition 3: 24 Hour
Replicate 10.23914382528858
Replicate 20.22974228011018
Replicate 30.45599384764369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_420169.p1 GENE.R_Transcript_420169~~R_Transcript_420169.p1 ORF type:complete len:96 (-),score=18.67 R_Transcript_420169:84-371(-)
ATGCAGGTAAATGCCAGAGCAAGCTATGGTCTCTCAATGAGAGGAAACTGTCCTGATTTACTTCTGTTTGATAAGAAGAATATTCCCTTACAGTCAGAAGGCTTCTCACCTGAGGTTAAACTCGCCGATTTTACCAAGAAGCGATGGATGTTGTGTTTGCCCAAGGCATACCATCCTCTGTTACTTCAGCAGTACCGGCATAATCTCCGGGAAGCCAAGAAGGATGTTGCTGTTGCCACTGCAGTACGATCATTGTCCTGCATATGTGCTTTACTTTTCTTGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_420169.p1 GENE.R_Transcript_420169~~R_Transcript_420169.p1 ORF type:complete len:96 (-),score=18.67 R_Transcript_420169:84-371(-)
MQVNARASYGLSMRGNCPDLLLFDKKNIPLQSEGFSPEVKLADFTKKRWMLCLPKAYHPLLLQQYRHNLREAKKDVAVATAVRSLSCICALLFLE*

Click here to download the sequence:
Link to NCBI Protein BLAST