Transcript Information: R_Transcript_42062.p1


Annotated TAIR IDAT1G68070.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25515412-25516767 | Reverse length=343
E-Value4.9E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.931709184313
Replicate 230.208962843857
Replicate 337.457190814117
Condition 2: 8 Hour
Replicate 138.72764353901
Replicate 239.587887749446
Replicate 342.600718802949
Condition 3: 24 Hour
Replicate 140.644689326599
Replicate 234.20815664661
Replicate 336.125879929649


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42062.p1 GENE.R_Transcript_42062~~R_Transcript_42062.p1 ORF type:complete len:392 (+),score=56.59,zf-RING_2|PF13639.2|1.4e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|3.9e-13,zf-RING_11|PF17123.1|9.7e-07,zf-rbx1|PF12678.3|2.4e-06,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|9.1e-06 R_Transcript_42062:94-1269(+)
ATGTCTGAATCGACGGACAGTGCAGGGGCTCCACTACTCCGGCCACGGCAGGGCCTGGACACATCTTTGGACACCACAAACACAAACCGTATCCCTCAAACAACAGCCCTAGCCCTCCTATTGGGCCGGGCCGCCGGTCGTCGAGGCCCATCCATGCTTGTCAGGGAAACAGCAGCTCGTGAGCTCGAAGAGCGTCGCGCTGACTGGGGTTACTCCAAACCTGTCGTGGCTCTTGACATGGTCTGGAATATGACCTTCGTTATGGCCTCCTTAATCATGCTCATATTCACCCCCACCGAGCACCCCAACGTTCCTATTAGGGTTTGGATCTGTGGCTACGCTTTGCAGTGCTTTGTGCACGTCGTGTTGGTCTGGTTCGAGTATCGCAGGAGGTTGTCAAGGAGGAGAGAGAGTGTCAATGGTCTTGCTTCTGGTGCTGGTGTTAGTCGTGCTGGTGATTTGGAGAGTGGTGAGTTCGGGGGTCGGTTTGTGTATGATGGGAATGATAGCGATGGCGATGATGATGATGGTGCTATTGGGATGTTTGGGTCTGCTTCTGGGTCGAGTTTTGCTAAAAAGTGCGAGTCAGTAAACACAATGGCTTCATTTCTCTGGTGGATAGTTGGCTTCTACTGGGTTGTCTCTGGTGGTGAACAGCTACTGCAAGATGCCCCACGGCTATACTGGTTGACCGTTGTTTATCTGGCATTTGATGTTTTCTTCGCCATATTCTGTGTTGTCTTGGCCTGTTTGATAGGGATTGCCCTCTGCTGCTGCTTGCCATGTATCATCGCGATTCTTTATACTGTGGCTGGACAAGAAGGTGCTTCTGAGGCAGAGCTCAGTATGCTTCCAAAATATAGATTTCGAGTTTCAAATAATGACGAAAAGCCAGGTGTAGGAGCTGGAGTGATGATCCCTGTAGAGAGTGTCAGTGGATTCTTGGCAATGGAACGTGTTCTTTTACCTGAGGATGCAGAGTGTTGTATCTGTCTCTGTTCGTATGATGACGGTGCAGAGCTCCATGCTCTTCCATGCAACCATCACTTCCACACGACCTGCATTGTGAAATGGCTCAAGATGAATGCAACATGTCCTCTTTGCAAATACAACATCCTCAAAGGAAATGAACAGTGCCGGATACCTACAAGCTACCCGGAACTTACAGACGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42062.p1 GENE.R_Transcript_42062~~R_Transcript_42062.p1 ORF type:complete len:392 (+),score=56.59,zf-RING_2|PF13639.2|1.4e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|3.9e-13,zf-RING_11|PF17123.1|9.7e-07,zf-rbx1|PF12678.3|2.4e-06,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|9.1e-06 R_Transcript_42062:94-1269(+)
MSESTDSAGAPLLRPRQGLDTSLDTTNTNRIPQTTALALLLGRAAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMVWNMTFVMASLIMLIFTPTEHPNVPIRVWICGYALQCFVHVVLVWFEYRRRLSRRRESVNGLASGAGVSRAGDLESGEFGGRFVYDGNDSDGDDDDGAIGMFGSASGSSFAKKCESVNTMASFLWWIVGFYWVVSGGEQLLQDAPRLYWLTVVYLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYTVAGQEGASEAELSMLPKYRFRVSNNDEKPGVGAGVMIPVESVSGFLAMERVLLPEDAECCICLCSYDDGAELHALPCNHHFHTTCIVKWLKMNATCPLCKYNILKGNEQCRIPTSYPELTDG*

Click here to download the sequence:
Link to NCBI Protein BLAST