Transcript Information: R_Transcript_420829.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24701529901527
Replicate 30.53898206108594
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.21354836023985
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_420829.p1 GENE.R_Transcript_420829~~R_Transcript_420829.p1 ORF type:3prime_partial len:85 (+),score=25.21 R_Transcript_420829:111-362(+)
ATGACTGTGTGTTTGCATGCTTCTTCTAATTCTTCTGTTCCTAAGAATTGGTGTGGTCTAGTTTCTTTTTCTTCTCTTCCTCTTGTTCATCAAGCCAATATTATTCATGCTTCATCTTACCTTGAGCCTACTTCCTATTATGATGCTTCACTTGATCCACATTGGGTTGATGCTATGGAAAAAGAGATAAAAGCTTTACAGGCTAATGGAACTTGGATTCTCACTGATTTACCTGCTGGGAAGAAAGCCATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_420829.p1 GENE.R_Transcript_420829~~R_Transcript_420829.p1 ORF type:3prime_partial len:85 (+),score=25.21 R_Transcript_420829:111-362(+)
MTVCLHASSNSSVPKNWCGLVSFSSLPLVHQANIIHASSYLEPTSYYDASLDPHWVDAMEKEIKALQANGTWILTDLPAGKKAI

Click here to download the sequence:
Link to NCBI Protein BLAST