Transcript Information: R_Transcript_42085.p1


Annotated TAIR IDAT3G16330.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5535263-5535880 | Forward length=205
E-Value7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.699234072361
Replicate 223.702009232831
Replicate 325.386332902952
Condition 2: 8 Hour
Replicate 124.107217551154
Replicate 235.154994647225
Replicate 324.701160844238
Condition 3: 24 Hour
Replicate 123.549503290274
Replicate 216.484600717184
Replicate 320.872295706577


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42085.p1 GENE.R_Transcript_42085~~R_Transcript_42085.p1 ORF type:5prime_partial len:194 (+),score=15.38,DUF761|PF05553.7|5.9e+03,DUF761|PF05553.7|1.9e-05 R_Transcript_42085:1-582(+)
AAAATGGACCAAAACATGATACAAGTAAGCACAGCCAAGAAGGTATGGCACATAATGAGGTTCGCTTTCTACATGCTCAAGAAAGGTATTTGCAAGAAGAAGATGCTCGTTGAGCTCAACTTGATGATGAAACGAGGAAAACTCGCCGGAAAAGCCCTCACCAATCTCATGTTCAATCACCAAACCGCCACCACTTGGGTCGACGGTCATGATGACCCAACCCGAATCCAGCACGCTCCTGGAGAGTATGAGTTCAGCTGTAAAAGTACTCCCTTGTACCGTCAATACTTCACCAAGAGAAAAAACCACCACCAAAAAATGCCTTCCTACTTGAGTAATTACAGCTTCGAGGGGAATGATAATGTCTACAATTTGGAGTCGGTTAACAAGGTGCTCGAAATGATGGTATCCAACCATGACCATGTTTGGGCTTCACCCGCGTTAGGTTTCGGGCGAAGCCCAGCGGTCCGTCAGCTTAGGATAACGGACTCACCGTTCCCGGTTCAAAATATGGAGGGGGACAGTCATGTGGACATGGCTGCTGAGGAGTTCATTAGGAAGTTTTATTCCCAACTCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42085.p1 GENE.R_Transcript_42085~~R_Transcript_42085.p1 ORF type:5prime_partial len:194 (+),score=15.38,DUF761|PF05553.7|5.9e+03,DUF761|PF05553.7|1.9e-05 R_Transcript_42085:1-582(+)
KMDQNMIQVSTAKKVWHIMRFAFYMLKKGICKKKMLVELNLMMKRGKLAGKALTNLMFNHQTATTWVDGHDDPTRIQHAPGEYEFSCKSTPLYRQYFTKRKNHHQKMPSYLSNYSFEGNDNVYNLESVNKVLEMMVSNHDHVWASPALGFGRSPAVRQLRITDSPFPVQNMEGDSHVDMAAEEFIRKFYSQLK*

Click here to download the sequence:
Link to NCBI Protein BLAST