Transcript Information: R_Transcript_42091.p1


Annotated TAIR IDAT3G50910.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18920189-18921999 | Forward length=447
E-Value1.5E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.496391341149
Replicate 211.098044505757
Replicate 312.996067452511
Condition 2: 8 Hour
Replicate 116.090711251047
Replicate 216.428402985361
Replicate 317.077331624487
Condition 3: 24 Hour
Replicate 122.067606539283
Replicate 218.589432493487
Replicate 321.217672910768


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42091.p1 GENE.R_Transcript_42091~~R_Transcript_42091.p1 ORF type:complete len:490 (+),score=104.82 R_Transcript_42091:525-1994(+)
ATGCCAACGTTTACAGCAATAGCACTGGATCGATTACTGGAGCCCGGAGCTTCGAAATCGCTGTCATCGTCAACAGCGGCAGCGAAAAAGAACGGTAATGGTTATGGTAATGGTAATTCGGATCCTCCTTACAGGCTTGAGAGGCGAAATACGGCGCCTGTGCAAGATGATTTGAAATCATCGTCTTCAAAGAGGCTCGAAATTCTGCCTTCTCACCCACAGCTTCGTCGCCGTAATACGGTGTCTTTTACGGCGGAGAAGAAAGTCTCGTCATCGAGGCCTCATATTTCGCCGGCTTTATACGCAACACCTGAATCTACTCCTCTTCCTGATTCTCCAACCTCTTCCTTCCCTCCTTCTTCGCCCTACCTTATCAATCACAAGCGTAGAGGTCCTCGTCTTCTCAAAAGCTTCTCCGAGCAGAACGTTGTTGCGGCTGAGAAGAAGGATGCTGACGTAGAAGTCGAATCGAGGCTCAGCAATGGTCATTCTAGAAGTCTATCGGCGGAGAATGTGATTTCGGAGCGTAAGGACGGTGGATTTGACGAGGATTTGGTCAACGGAGACGTTCAGGTTGAAATTAACGGCTCCAATGGCGAGGTTGGAGGTCAGGAAGTTGAAATTAATGGCGCCAATGGCTTTGTTGGAGGTCAGGAAGGTGAAATCAATGGTGAGCTGAAGGTTGTGATTGGTTCGAGCTCAGAGAGAGATGGAGGCGGTGATGGCGAGGATTTCTTCGACCCGCAGGAATCGATGAGCTTCACGAGCAATAACGATGGGGAGGAGTTCAGTGCCGAGCGGTCTGCTAAGGTGAACACTCCTATGGGAGAGTTTTATGATGCGTGGGAAGAACTATCCTCTGATAGTGGGCGACAAGGACATCGTTCTCTTACTGATTTTGAGACTGAACTGCGAGAAATGAGGCTGAGCTTGTTGATGGAGATTGAAAAGAGGAAACAAGCAGAAGAAACTTTAAATGGCATGCGAAGTCAGTGGCAAATACTGAGAGAGAAGTTAGGGGCTGTTGGGTTGGTTCTCCCTGAAGAACTTTCTGCTTCATCAGAGGATAGCCAATCAGATGTTGAACCAATAGAAAATATTTGTCGACAAATTTATCTAGCTCGTTTCGTGTCAGAGTCTGTTGGTAGGGGAATGGCAAAGGCTGAAGCCGAGGCAGAGATGGAAGCTCAGCTGGAAATTAAAAACTTTGAGATTGCTCGTTTATGTGACAGGTTGCATTATTACGAGACCATGAACAGGGAGATGTCACAAAGGAACCAAGAAGCCATTGAGGTTGCAAGGCATGAAAGACAGAAGAGGAGGAGAAGACAGAAGTGGGTCTGGGGCTCAATTGCTGCAGCGATCACACTTGGCAGTGCTGCTTTGGCATGGTCATACATCCCCAGTGGAAAAGGATCGTCTTCGAGCAGTACTCTTGAATCCTCCAAACCTGACAGCAATGTGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42091.p1 GENE.R_Transcript_42091~~R_Transcript_42091.p1 ORF type:complete len:490 (+),score=104.82 R_Transcript_42091:525-1994(+)
MPTFTAIALDRLLEPGASKSLSSSTAAAKKNGNGYGNGNSDPPYRLERRNTAPVQDDLKSSSSKRLEILPSHPQLRRRNTVSFTAEKKVSSSRPHISPALYATPESTPLPDSPTSSFPPSSPYLINHKRRGPRLLKSFSEQNVVAAEKKDADVEVESRLSNGHSRSLSAENVISERKDGGFDEDLVNGDVQVEINGSNGEVGGQEVEINGANGFVGGQEGEINGELKVVIGSSSERDGGGDGEDFFDPQESMSFTSNNDGEEFSAERSAKVNTPMGEFYDAWEELSSDSGRQGHRSLTDFETELREMRLSLLMEIEKRKQAEETLNGMRSQWQILREKLGAVGLVLPEELSASSEDSQSDVEPIENICRQIYLARFVSESVGRGMAKAEAEAEMEAQLEIKNFEIARLCDRLHYYETMNREMSQRNQEAIEVARHERQKRRRRQKWVWGSIAAAITLGSAALAWSYIPSGKGSSSSSTLESSKPDSNVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST