Transcript Information: R_Transcript_421069.p1


Annotated TAIR IDAT1G47980.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17691985-17693818 | Reverse length=315
E-Value5.9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17383772337827
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.42592155887972
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.41690866070281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_421069.p1 GENE.R_Transcript_421069~~R_Transcript_421069.p1 ORF type:complete len:105 (+),score=20.17 R_Transcript_421069:27-341(+)
ATGCTTTCTGAGCCCCAAAGGGAGGTGGCCCTCCAGCAGCAAGATGAGGATCAAGCTTGTCTAACCCATGACCAAGTGCACCCCCACAAGAAGAACTCAGCCTCCAAATACTCCAAGTTCAATGGGAATTCCAGCAAGTCCACATCCCCTTGTGGGATTGAGCTCTTATGGTGGTGGTTATGGCGTTCGACGACGAGATTGCTAGTCTCATTCAAAGAACTGCTGGTTGAGACGTTCAAGAGTGCAAAAAAGGATGCTAGGAAAGTGAAAGTGGATGTAGAGATCATGAAAGGCAACACCATTTTTTCTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_421069.p1 GENE.R_Transcript_421069~~R_Transcript_421069.p1 ORF type:complete len:105 (+),score=20.17 R_Transcript_421069:27-341(+)
MLSEPQREVALQQQDEDQACLTHDQVHPHKKNSASKYSKFNGNSSKSTSPCGIELLWWWLWRSTTRLLVSFKELLVETFKSAKKDARKVKVDVEIMKGNTIFSG*

Click here to download the sequence:
Link to NCBI Protein BLAST