Transcript Information: R_Transcript_42171.p1


Annotated TAIR IDAT1G12520.1
Annotated Gene Namecopper chaperone for SOD1
Annotated Gene Symbol(s)ATCCS, CCS
Annotation TypeOrtholog
Chromosome Positionchr1:4267277-4268900 | Reverse length=320
E-Value1.8E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.953585397033
Replicate 222.005131667532
Replicate 325.383141660601
Condition 2: 8 Hour
Replicate 120.882839774828
Replicate 225.248323039897
Replicate 328.181329401622
Condition 3: 24 Hour
Replicate 125.301847605308
Replicate 225.234395307237
Replicate 322.150620058512


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42171.p1 GENE.R_Transcript_42171~~R_Transcript_42171.p1 ORF type:complete len:333 (+),score=67.93,Sod_Cu|PF00080.16|3.2e-18,HMA|PF00403.22|1.2e-09 R_Transcript_42171:236-1234(+)
ATGAAAATTCTAAGATCAGTAGCAACAAAGACGACGGCGATTGTTGCCACAGTAGCTATTCCCGCTGCTTTTGCTGCTGCTTCTCTCTCTAATTCCAACCCTTCTTCTTCAACTTCTCCGTCATCGCCAATCTTAAAATATCAGGATTTGCGTTTTCTCTCTCCTAAATCGTCATTTCTGAGTTCAGGAAGTAGTACTAGTAGCAGATTCGGACTTGCTAAGAGTTTCTGCTCTCCACCTTCTCCCGTTCTAATGGACTCTCCCTTACCTTCCTCTCAGGAGAATTCTTCGTTGCCGGAGTTGATGACGGAATTCATGGTGGATATCAAGTGTGAAGCCTGTGTCAATGCCATCAAGAGTAAATTACAGATCGTAGAAGGGGTCAAGAATGTGGAAGTGGACTTGAGTAATCAAGTAGTTAGGATTCTTGGGTCTTCACCTCTTAAATCCATGGAAGAGGCTTTGGAACAAACGGGTCGTAAAGCTCGACTCATCGGTCAAGGTTTACCTGAAGATTTTCTTGTGTCTGCTGCTGTTGCTGAATTTAAGGGCCCAAATATTTTTGGCGTGGTTCGCTTTGCTCAGGCAAATATGGAATTGGCCAGAATCGAAGCCAACTTCAGTGGGTTATCACCAGGAAAGCATGGTTGGTCTATAAATGAATTTGGTGATCTGACTAGAGGTCCTTCCAGCACAGGGAAGGTGTATAACCCGCCCAACCAAGGAGGTGAATCAGAGCCATTGGGTGACCTGGGAACATTAGAGGCCAATGAGAAAGGGGACGCTTACTATTCGGGTGTCAAGAAAATGCTCAGGGTAGTTGATTTAACTGGGCGATCCATTGTTATTTATAAAATTGAGGACAAGACCGATCCAGGCCTCACAGCTGCTGTAATTGCTAGAAGTGCTGGAGTAGGTGAAAACTACAAGAAGCTTTGCACATGCGATGGAACCACCATATGGGAAGCAAAACCTGATTTTGTTACGAGCAAGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42171.p1 GENE.R_Transcript_42171~~R_Transcript_42171.p1 ORF type:complete len:333 (+),score=67.93,Sod_Cu|PF00080.16|3.2e-18,HMA|PF00403.22|1.2e-09 R_Transcript_42171:236-1234(+)
MKILRSVATKTTAIVATVAIPAAFAAASLSNSNPSSSTSPSSPILKYQDLRFLSPKSSFLSSGSSTSSRFGLAKSFCSPPSPVLMDSPLPSSQENSSLPELMTEFMVDIKCEACVNAIKSKLQIVEGVKNVEVDLSNQVVRILGSSPLKSMEEALEQTGRKARLIGQGLPEDFLVSAAVAEFKGPNIFGVVRFAQANMELARIEANFSGLSPGKHGWSINEFGDLTRGPSSTGKVYNPPNQGGESEPLGDLGTLEANEKGDAYYSGVKKMLRVVDLTGRSIVIYKIEDKTDPGLTAAVIARSAGVGENYKKLCTCDGTTIWEAKPDFVTSKV*

Click here to download the sequence:
Link to NCBI Protein BLAST