Transcript Information: R_Transcript_42179.p1


Annotated TAIR IDAT3G54070.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20021330-20023603 | Reverse length=574
E-Value4E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0346596217699
Replicate 22.1030220126179
Replicate 33.0344951258231
Condition 2: 8 Hour
Replicate 11.6218424278466
Replicate 22.9260604671018
Replicate 33.7534832946842
Condition 3: 24 Hour
Replicate 10.92721353908337
Replicate 21.1758054012747
Replicate 32.3691053538322


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42179.p1 GENE.R_Transcript_42179~~R_Transcript_42179.p1 ORF type:complete len:619 (+),score=108.05,PGG|PF13962.2|1.8e-28,Ank_5|PF13857.2|13,Ank_5|PF13857.2|0.016,Ank_5|PF13857.2|7.2e-05,Ank_5|PF13857.2|7.9e+02,Ank_5|PF13857.2|11,Ank_2|PF12796.3|44,Ank_2|PF12796.3|0.001,Ank_2|PF12796.3|1.8e-09,Ank_2|PF12796.3|0.01,Ank_4|PF13637.2|2.7e+02,Ank_4|PF13637.2|2.9,Ank_4|PF13637.2|9.5e-06,Ank_4|PF13637.2|1.5e+03,Ank_4|PF13637.2|3.2e+03,Ank_4|PF13637.2|2.1,Ank_3|PF13606.2|3.4e+03,Ank_3|PF13606.2|3.7e+02,Ank_3|PF13606.2|1.5e+02,Ank_3|PF13606.2|0.086,Ank_3|PF13606.2|5.3e+03,Ank_3|PF13606.2|5.8e+02,Ank_3|PF13606.2|1.5e+03,Ank_3|PF13606.2|1.6e+04 R_Transcript_42179:279-2135(+)
ATGGCGGGACGGCCATCGTCGGTAACCAACAACCAACAAGCGTCGCCGTCAACTCTGGTGACAAACCATGAAATCGTAGTGGTCTCCATCGATAATCCGCCTGAATCCTCCGCTCCTGCAGCCGCATCATCACCACCATCATCTCAAGAACAAGAAAGAAGACAGAGGTTGCTGAAATACGGGCTGCCTCTCTACCAAGCTGCATTGCAAGGCGATTGGGAGACCGCGGAAAGAATTTTGATGGAATCTCCTGAGTGGATAAGAGAACCAATAGCAAAAAGAGGTGAAAGAGTTGTTCACATTGCAGCTGCTGCTAAACAAACCCACTTTGTAGAAGAGCTGGTGAAGCTGATGGAAATACAGGACTTGACCCTTAAAAATGACAACCAGAACACAGCGCTCTGTTTGGCAGCAACTTCTGGTGTCGTTGAGATAGCAATAGCCATGGTGGAGAAGAACCGCGAGTTGCCAAACATCAGAGGAAGCCAGGGGATGACCCCTCTTCACATGGCGGTTTTGCTTGGACGTAGAGACATGGTCAAGTACCTGCACCGTGTCACTGATGACAAGCAGCTGACAGACAAGGATCGCATTGCACTCCTTACTGCCTCCATTGATACTGATTTGTTTGATGTGGCAAGGGATGTACTGGCTGCACATCCGAAATTGGCGATTCTTCGTGATGGAAAGAAAGAGACTGCATTACATTCATTGGCTCGGAAGCCTCAAAAGCCCAGTGAATATCATCAAGAAGGCACTTGGAAGAGACTCGAAAGACTGGGAAGTATTCTTGCTGAGGGAAAACTCAGTGAACAGCCGATAGAATTACAGCTGGTACAGAGTTTGTGGGATGAAGTCATCAAACAAGACGAGAAGACAGTCTCAGACCTTATTGGCTGGCCTTGGAGATTGCTGTTTGAAGCTGCGAAATTGGGTAAAACCGAGTTTCTGACCATAATCATCCGTTCCTATCCTGATGTCATATGGAAGGTTGACGACCACAATCATAGCATATTCCATGTTGCCATTATGAACCGCCACCAGGAAATCTTCAAGCTGATATATGAGCTTGGAGCAATTAAGGACTTGATAGCTATTCACAGGGATAACAAGAACAACAACAATATGCTCCACCTTGCTGGGGCCTTGGCTCCTCCTCATCGCCTTAACTGCGTCTCTGGAGCTGCTCTACAGATGCAAAGGGAGCTACTATGGTTTAAGGCAGTCGAGAAAGTAGTGAGGCCTGAGTACGCGGAAATGGAGAACAAAGAAGGCAAGATCCCTCATGCCTTATTCACTGAAAACCATGAGAATTTAAGAATAAAAGGGGAAGAGTGGATGAAGAAGACAGCAGAGTCATGTACTTTAGTAGCAACCCTGATTGCCACTGTGGCGTTTGCCGCGGCATTTACACTACCTGGTGGCACTGACAGTCAAGGAAATCCATCACTTGTTCACAGCCCTTCATTCATGGTTTTTGCAATTTGTAACGCAATCTCTTTGTTCAGCTCTTCCGCTTCAATACTGATGTTCTTGTCAATCCTCACCTCACGCTATGCGCAACAAGACTTTCTCAGGTCTTTGCCATTGAAATTGATGGTGGGATTAACAGGACTATTCATCTCAATAGCTACCATGACAGCAGCCTTCACTGCTACATTCTTCATTACTTTCAGGAAAGGAGTGAAATGGATCCCAATCCCCATTGCACTTCTTGCTGCTGTTCCTGTCGCCCTTTTCGTTCTCGAGCAATACCCTCTCTTGTTGGATATATACCGTTCCACTTACCAATCGTGGTCCTTATTTGAACCCAGCAAACCAAAGCTCTTTCGAAAGTATTCGACAAAAGTTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42179.p1 GENE.R_Transcript_42179~~R_Transcript_42179.p1 ORF type:complete len:619 (+),score=108.05,PGG|PF13962.2|1.8e-28,Ank_5|PF13857.2|13,Ank_5|PF13857.2|0.016,Ank_5|PF13857.2|7.2e-05,Ank_5|PF13857.2|7.9e+02,Ank_5|PF13857.2|11,Ank_2|PF12796.3|44,Ank_2|PF12796.3|0.001,Ank_2|PF12796.3|1.8e-09,Ank_2|PF12796.3|0.01,Ank_4|PF13637.2|2.7e+02,Ank_4|PF13637.2|2.9,Ank_4|PF13637.2|9.5e-06,Ank_4|PF13637.2|1.5e+03,Ank_4|PF13637.2|3.2e+03,Ank_4|PF13637.2|2.1,Ank_3|PF13606.2|3.4e+03,Ank_3|PF13606.2|3.7e+02,Ank_3|PF13606.2|1.5e+02,Ank_3|PF13606.2|0.086,Ank_3|PF13606.2|5.3e+03,Ank_3|PF13606.2|5.8e+02,Ank_3|PF13606.2|1.5e+03,Ank_3|PF13606.2|1.6e+04 R_Transcript_42179:279-2135(+)
MAGRPSSVTNNQQASPSTLVTNHEIVVVSIDNPPESSAPAAASSPPSSQEQERRQRLLKYGLPLYQAALQGDWETAERILMESPEWIREPIAKRGERVVHIAAAAKQTHFVEELVKLMEIQDLTLKNDNQNTALCLAATSGVVEIAIAMVEKNRELPNIRGSQGMTPLHMAVLLGRRDMVKYLHRVTDDKQLTDKDRIALLTASIDTDLFDVARDVLAAHPKLAILRDGKKETALHSLARKPQKPSEYHQEGTWKRLERLGSILAEGKLSEQPIELQLVQSLWDEVIKQDEKTVSDLIGWPWRLLFEAAKLGKTEFLTIIIRSYPDVIWKVDDHNHSIFHVAIMNRHQEIFKLIYELGAIKDLIAIHRDNKNNNNMLHLAGALAPPHRLNCVSGAALQMQRELLWFKAVEKVVRPEYAEMENKEGKIPHALFTENHENLRIKGEEWMKKTAESCTLVATLIATVAFAAAFTLPGGTDSQGNPSLVHSPSFMVFAICNAISLFSSSASILMFLSILTSRYAQQDFLRSLPLKLMVGLTGLFISIATMTAAFTATFFITFRKGVKWIPIPIALLAAVPVALFVLEQYPLLLDIYRSTYQSWSLFEPSKPKLFRKYSTKVE*

Click here to download the sequence:
Link to NCBI Protein BLAST