Transcript Information: R_Transcript_421868.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeOrtholog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value3.2E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55312002893087
Replicate 20.27267922618569
Replicate 30.09916336621711
Condition 2: 8 Hour
Replicate 10.95399473820436
Replicate 20
Replicate 30.31431360381622
Condition 3: 24 Hour
Replicate 10.19876889374636
Replicate 20.4773865560731
Replicate 30.18950393668309


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_421868.p1 GENE.R_Transcript_421868~~R_Transcript_421868.p1 ORF type:complete len:231 (+),score=42.17,AP2|PF00847.16|1.3e-11 R_Transcript_421868:156-848(+)
ATGGTACTTCCTTCTAAGAAGTTCAGAGGCGTCAGGCAACGCCAGTGGGGCTCTTGGGTTTCAGAAATCCGCCATCCTTTATTGAAGAAAAGGGTATGGCTAGGGACATTTGAGACAGCAGAGGAAGCTGCAAGAGCATATGACCAAGCAGCCATATTGATGAATGGCCAAAATGCCAAGACTAATTTCCCAAGAGATCATCACAAGAGTACTAATAACCAACTAAGTAACAATGGTACTCTAAGGGCTAATAGTAGTACCAATGATCAAGATACAATGGCTCCATTTAATGCAGCATTGTCCGAGATACTTAGTGCCAAGCTCAAGAGATATTGCAAGGATCCTTCCCCTTCCCTTACTTGTCTCCGTCTCGACACCGATAACTCTCACATTGGTGTGTGGCAAAAACGTGCCGGTACGTGCTCCGGATCAAATTGGGTCATGAGGGTTGAGCTTGGCAAGGCAAGTACAATGGCTAAACAAAATGTCACAATTAACAACAATGATGGTTCGTCTCCTAAATCGTCCTACTTATCATCATCATCGTCTTCTTCTTCTTCTTCCTTTTCTTCTTCTTTACCTTCCTCAATCTCGCCACCAGAAGCTGGAGTGATGAGTGAGGAAGACAAAGCTGCATTGCAAATGATAGAGGAATTGCTTAATTGGAACACCCCTAGTACTCCATTTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_421868.p1 GENE.R_Transcript_421868~~R_Transcript_421868.p1 ORF type:complete len:231 (+),score=42.17,AP2|PF00847.16|1.3e-11 R_Transcript_421868:156-848(+)
MVLPSKKFRGVRQRQWGSWVSEIRHPLLKKRVWLGTFETAEEAARAYDQAAILMNGQNAKTNFPRDHHKSTNNQLSNNGTLRANSSTNDQDTMAPFNAALSEILSAKLKRYCKDPSPSLTCLRLDTDNSHIGVWQKRAGTCSGSNWVMRVELGKASTMAKQNVTINNNDGSSPKSSYLSSSSSSSSSSFSSSLPSSISPPEAGVMSEEDKAALQMIEELLNWNTPSTPFN*

Click here to download the sequence:
Link to NCBI Protein BLAST