Transcript Information: R_Transcript_421869.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeHomolog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11852572048519
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15899912303406
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.14907667030977
Replicate 20.14321596682193
Replicate 30.28425590502464


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_421869.p1 GENE.R_Transcript_421869~~R_Transcript_421869.p1 ORF type:complete len:154 (+),score=27.59 R_Transcript_421869:47-463(+)
ATGGCTCCATTTAATGCAGCATTGTCCGAGATACTTAGTGCCAAGCTCAAGAGATATTGCAAGGATCCTTCCCCTTCCCTTACTTGTCTCCGTCTCGACACCGATAACTCTCACATTGGTGTGTGGCAAAAACGTGCCGGTACGTGCTCCGGATCAAATTGGGTCATGAGGGTTGAGCTTGGCAAGGCAAGTACAATGGCTAAACAAAATGTCACAATTAACAACAATGATGGTTCGTCTCCTAAATCGAACCTATCATCATCATCATCGTCGTCCTCTTCTTCTTCTTTTTCTTCTTCTTCTTCGCCTTTCTCAATCTCGCCACCAGATGGGGCGATGAGTGAGGAAGACAAAGCTGCATTGCAAATGATAGAGGAATTGCTTAATTGGAACACCCCTAGTACTCCATTTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_421869.p1 GENE.R_Transcript_421869~~R_Transcript_421869.p1 ORF type:complete len:154 (+),score=27.59 R_Transcript_421869:47-463(+)
MAPFNAALSEILSAKLKRYCKDPSPSLTCLRLDTDNSHIGVWQKRAGTCSGSNWVMRVELGKASTMAKQNVTINNNDGSSPKSNLSSSSSSSSSSSFSSSSSPFSISPPDGAMSEEDKAALQMIEELLNWNTPSTPFN*

Click here to download the sequence:
Link to NCBI Protein BLAST