Transcript Information: R_Transcript_422146.p1


Annotated TAIR IDAT5G43470.1
Annotated Gene NameDisease resistance protein (CC-NBS-LRR class) family
Annotated Gene Symbol(s)RPP8, HRT, RCY1
Annotation TypeHomolog
Chromosome Positionchr5:17463130-17466658 | Reverse length=908
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94030404918248
Replicate 20.50900122221329
Replicate 30.76355791987175
Condition 2: 8 Hour
Replicate 10.14839918149846
Replicate 20.067760248003593
Replicate 30.2750244033392
Condition 3: 24 Hour
Replicate 10.13913822562245
Replicate 20.2005023535507
Replicate 30.33163188919541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_422146.p1 GENE.R_Transcript_422146~~R_Transcript_422146.p1 ORF type:5prime_partial len:330 (+),score=37.44,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|7.5e+03,LRR_4|PF12799.3|8.1e+02,LRR_4|PF12799.3|19,LRR_4|PF12799.3|2.4 R_Transcript_422146:2-991(+)
ATCTATTCTAGCCCTTCTTCTTCTGACTGCTTTGTTAAAGCTCCGCACCTGCACTCACTTCTCAGTTTCAAGCCTAAGGCTGATGGTAATATTAGTAATATATCAGTCAAACAACTGTCTTTTATTTGCTTGTATTCTAAACTCTTGAAGGTACTTTACTTGGAGGGCATGAATATCGAGCGGTTACCTCATGCAATTGGTTTTCTTAGGGACTTGAGGTACTTGAATTTACGCAGAACTAGCATTCGAATTCTTCCCCACTCAATGAAGTTTTTGCTGCGATTATCAACGCTTGATGTTAGGGAAAACCCAGGACTCAAGGGCATCAGTATTGTGAAGACGCTACACAAATTGCAGAACCTGTATATTGATGCTTCTCTTGAGCCCATGCCAGTAGAGTCTTCTAGTCATCTCTGTACTCTTGGATGGGTAAATTCACAGCAAATAGACAGGAATGACATTACAAAGATGAAGTTACAGGTCCTAAAAATTATCATCACTGATTTGAGCAGATCTGATAAACTCTTTACAGCCTTGGCTACATCGGTTCACCTGGTATGCCTAAAGCTGCACATCAAAGATTACCATCCTGTCCTCAAAAGGCTTCCATGTAAAATATTCAGTAAGATGCTCAACCTTAGGACCTTTCATCTGAGAGGGTGGATGAATGAGTCAGAGGTGCATATTACAGGGAAATTCCATGTGCCCGTAGATGAACTAGAGAGCCTTCCTCATTTGTCTATTCTCAGATTGCAATCCATTTACACTGCAGAGGATGAACTGCTGATATCTGGAGGTGGATTTCCTCAACTCGTCTACCTCGAGCTTTCCAATGTGAGGAACTTGAAATCCCTGAAGGTTAAGAGAGGTCAATCAGGTGATGTTATGCCCAACCTTAAAGAGCTTCGGATAACTGCTTGCCATGACATGATGCTTCAGTCTGAAACACTGAAGTATTTCAGGGCACGTCGTGTGTTGCAAACGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_422146.p1 GENE.R_Transcript_422146~~R_Transcript_422146.p1 ORF type:5prime_partial len:330 (+),score=37.44,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|7.5e+03,LRR_4|PF12799.3|8.1e+02,LRR_4|PF12799.3|19,LRR_4|PF12799.3|2.4 R_Transcript_422146:2-991(+)
IYSSPSSSDCFVKAPHLHSLLSFKPKADGNISNISVKQLSFICLYSKLLKVLYLEGMNIERLPHAIGFLRDLRYLNLRRTSIRILPHSMKFLLRLSTLDVRENPGLKGISIVKTLHKLQNLYIDASLEPMPVESSSHLCTLGWVNSQQIDRNDITKMKLQVLKIIITDLSRSDKLFTALATSVHLVCLKLHIKDYHPVLKRLPCKIFSKMLNLRTFHLRGWMNESEVHITGKFHVPVDELESLPHLSILRLQSIYTAEDELLISGGGFPQLVYLELSNVRNLKSLKVKRGQSGDVMPNLKELRITACHDMMLQSETLKYFRARRVLQTD*

Click here to download the sequence:
Link to NCBI Protein BLAST