Transcript Information: R_Transcript_422148.p1


Annotated TAIR IDAT1G71270.1
Annotated Gene NameVps52 / Sac2 family
Annotated Gene Symbol(s)POK, TTD8, ATVPS52
Annotation TypeOrtholog
Chromosome Positionchr1:26863736-26869817 | Forward length=707
E-Value5.6E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14602368763775
Replicate 20
Replicate 30.18325390076922
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1452128849631
Condition 3: 24 Hour
Replicate 10
Replicate 20.35288414224924
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_422148.p1 GENE.R_Transcript_422148~~R_Transcript_422148.p1 ORF type:5prime_partial len:125 (+),score=12.26,Vps52|PF04129.8|2.2e-10 R_Transcript_422148:3-377(+)
TCTCTTCAACAAAGTGTTCTCTTGAAATACAAGTATGTTATTACCTTTCTCAAAGAGCATGGGAGGGAGATTTATACCGAGGTCCAGGCTGCATATATTGATACAATGAATAAAGTAAGTCAGTTTAGCCTACAGGATGGAAACGTTATTGCATTCTTGTTATTAGTTTTGGGTTTGGTCAAGGTTGTTTACTTGAAATTGAAATGCTATGATTGGGATATTTTGTCAACCTGCACTAAATCTGTGTTTTTCAATATTAAAGTAACTTATACATCCTCAGACAAAATGGTTGAAAACTTGAACATATTTAACATGACTTTAGATGAAATGCCAAGATCTGTTTTGACAACTATATTTAGTGTTATGGAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_422148.p1 GENE.R_Transcript_422148~~R_Transcript_422148.p1 ORF type:5prime_partial len:125 (+),score=12.26,Vps52|PF04129.8|2.2e-10 R_Transcript_422148:3-377(+)
SLQQSVLLKYKYVITFLKEHGREIYTEVQAAYIDTMNKVSQFSLQDGNVIAFLLLVLGLVKVVYLKLKCYDWDILSTCTKSVFFNIKVTYTSSDKMVENLNIFNMTLDEMPRSVLTTIFSVMER*

Click here to download the sequence:
Link to NCBI Protein BLAST