Transcript Information: R_Transcript_422832.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value9E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41249629276201
Replicate 20
Replicate 30.12941659658843
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.41020588972626
Condition 3: 24 Hour
Replicate 10.64852562790125
Replicate 20.12460598243264
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_422832.p1 GENE.R_Transcript_422832~~R_Transcript_422832.p1 ORF type:3prime_partial len:177 (+),score=31.08 R_Transcript_422832:49-528(+)
ATGGCGCATTCTTCAGAAGATGCTTCGCTATTTTCAGGGGCTGTCAATCTAGGATGCCAGGTGTTTGATCTATACAGTGAGCTTCGTCAGGTGAATCGTGCTGTTTTTACACTGTGTAAGGGACTGAGACACCTAGCATTCTATCAAGGAGACAATGAAATCAAATATTCGGAACTCTTGACACCTGAGAGAAACCATCATTTTGATAAATTTGCCAAATCAGGTCGATCGTTATTATGCTCTCAAAAGTTTAGGCTGGCCATTTGCAATGCAATCAAATCTATACCTGAAGGGCAGGCTAGTGGATGTGTTCAAACTTTAACAGATGACATTTCAGATTCCTTGGCATGGATGAAAGTTGGTTGTTCAGTGACCGATGAACATGAATTTGGAGATGCTGCATCTTGTAGATTCACAATTCAAGCAGAACTTCTTGGAATTGTCTTGTCTGAAATTTGTTCTATGGTTCTGGATTCTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_422832.p1 GENE.R_Transcript_422832~~R_Transcript_422832.p1 ORF type:3prime_partial len:177 (+),score=31.08 R_Transcript_422832:49-528(+)
MAHSSEDASLFSGAVNLGCQVFDLYSELRQVNRAVFTLCKGLRHLAFYQGDNEIKYSELLTPERNHHFDKFAKSGRSLLCSQKFRLAICNAIKSIPEGQASGCVQTLTDDISDSLAWMKVGCSVTDEHEFGDAASCRFTIQAELLGIVLSEICSMVLDSL

Click here to download the sequence:
Link to NCBI Protein BLAST