Transcript Information: R_Transcript_423.p1


Annotated TAIR IDAT1G08820.1
Annotated Gene Namevamp/synaptobrevin-associated protein 27-2
Annotated Gene Symbol(s)VAP27-2
Annotation TypeHomolog
Chromosome Positionchr1:2821810-2824412 | Reverse length=386
E-Value5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.691745814444
Replicate 230.122143407696
Replicate 333.2372271003
Condition 2: 8 Hour
Replicate 125.206037445694
Replicate 227.622265803817
Replicate 329.896770433578
Condition 3: 24 Hour
Replicate 131.810817857995
Replicate 232.794584298081
Replicate 333.546841497238


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_423.p1 GENE.R_Transcript_423~~R_Transcript_423.p1 ORF type:complete len:306 (+),score=58.40,Motile_Sperm|PF00635.22|1.9e-27,Motile_Sperm|PF00635.22|3.1e+03 R_Transcript_423:342-1259(+)
ATGGGTACAGAATTAGTGGAGGTTCAACCTCTGGAGCTTCGTTTTATTGTTGAAGCAAACAAGCAAAGTTCATGTTCGATTCAACTTGGCAATAAATCTGATCAGTATGTTGCTTTCAAGGTGAAAACCACATCCCCCAAGAAGTATTGCGTGCGCCCTAATGTAGGTATCATAAAGCCAAACGGGACACATGGCTTCACAGTTACTATGCAAGTGCAGCGGGCTGCTCCACTTGACTTACAGTGCAAAGACAAGTTTTTAATTCAATGTACTGTTGTTAACAGTGGAACAATGGAAGAAGACATTACATCTGACATGTTTCTTAAAGACACTGGCAGACAAATCGAAGAGAAAAAGATGAGAGTGATCCTTGTATGTGCACCTCAATCCACTGTTCTAGTACCTGTTAATGGAGTCCCAAATCAAGATCCACCAAATGACACTGGAGTAAAAGATAGGACGCCAGTTGGAGTTGAAAATCTTCCACCTTCTCATAAGGAATCAGTAGGGTTGAAAATTGCAAAGCCTATTGAAGGCTTAAGATTCATTAGTGAAGCAGAGTCAGCATTGGAGTGCACGCCAGACCTGGCAACGACAAAATGTGCAGATACGAGAGAAGTAAAAAATGTGGAGGAGATACAGTCCTTGAATCCTGTGATGGAAGAATGGAAGAAACAGTATGAGGATCTAAATTCAAAAGTAGATATGTTGACATCAAAAGTAGCTGAGGCTGAACAAACTGTTGCCAAGCTAGCAGAAGAAAGAAACAATGCTGTGCAAGATAAGGAAATGGTCAATCGAGAACTAACATTTTTGAAGCGGAGACTTCGTGGGAAGACAGTTCATATTGGTTTTCCTCTGCTATATGTTTGTATGGTTGCACTGATCTCTCTTACACTAGGATATCTAATGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_423.p1 GENE.R_Transcript_423~~R_Transcript_423.p1 ORF type:complete len:306 (+),score=58.40,Motile_Sperm|PF00635.22|1.9e-27,Motile_Sperm|PF00635.22|3.1e+03 R_Transcript_423:342-1259(+)
MGTELVEVQPLELRFIVEANKQSSCSIQLGNKSDQYVAFKVKTTSPKKYCVRPNVGIIKPNGTHGFTVTMQVQRAAPLDLQCKDKFLIQCTVVNSGTMEEDITSDMFLKDTGRQIEEKKMRVILVCAPQSTVLVPVNGVPNQDPPNDTGVKDRTPVGVENLPPSHKESVGLKIAKPIEGLRFISEAESALECTPDLATTKCADTREVKNVEEIQSLNPVMEEWKKQYEDLNSKVDMLTSKVAEAEQTVAKLAEERNNAVQDKEMVNRELTFLKRRLRGKTVHIGFPLLYVCMVALISLTLGYLMQ*

Click here to download the sequence:
Link to NCBI Protein BLAST