Transcript Information: R_Transcript_42326.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value1.4E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.810948904655
Replicate 241.017108999096
Replicate 349.462336048329
Condition 2: 8 Hour
Replicate 149.459280302732
Replicate 261.245070175637
Replicate 364.414122644028
Condition 3: 24 Hour
Replicate 158.461141856388
Replicate 246.550258808873
Replicate 352.249631321155


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42326.p1 GENE.R_Transcript_42326~~R_Transcript_42326.p1 ORF type:complete len:452 (+),score=55.51 R_Transcript_42326:130-1485(+)
ATGGCGACTCTCTCAGCTTGGCCAAACAATCCCCCAAACCCTAACCCAATTTCCTCCCCCAATTTCCTCCACCACAATCACCAACCTCCTTCCCCTCCTGCAATGGCCTCACAAGAATCATCATCAGATCACCTCTACTTCGACACCACCGCCAATTCCGACGCCGATTCCGACACTTCTCTACCTTCTCTCCCCAAAATCATCGTCTCCCCTCAAAACCCCAACCCCAACCCTCTCCCAAACCCCAACCCTAACCTTAACCCTGATTCCCCCAATTCCATCCCCTCACATCAATCATCCAGCCTCCTCCACGTGTCCTTCAACCAAGACCACGGCTGCTTCTCTTCCGGCACCGATCGAGGCTTCCGAATCTACAACTGCGATCCTTTCCGAGAAATCTTTCGCCGGGACTTCGACCGAGGCGGCGGCATCGGAAAAGTCGAGATGCTTTTCCGGTGCAATATTCTAGCCCTAGTCGGTGGTGGCTCCGAGCCGCAGTACCCGGTCAACAAGGTCATGATATGGGACGACCACCAGAGCCGGTGCATCGGAGAGCTCTCGTTCCGCTCTGAAGTCCGTGGCGTTCGCCTTCGCCGTGATCGGATCGTGGTCGTGTTGGAGCAGAAGGTGTTTGTCTACAATTTCACCGACTTGAAGCTGCTTCATCAGATCGAGACAATCGCAAACCCTAGGGGTTTGTGTGAGGTTTCGCAGTCGGCCGGGAAGATGGTACTGGTTTGCCCTGGGTTGCAGAAGGGCCAGGTTAGGGTTGAGCATTACGCGTCCAAGAGGACTAAGTTCGTTATGGCTCATGATTCGAGGATCGCCTGCTTTGCTTTGACTCAGGATGGCGGGTTGCTTGCTACCGCTAGCTCCAAGGGGACGCTTGTTCGGGTTTTTAATACTTATGATGGTTCATTGTTGCAGGAGGTAAGACGAGGTGCAGACAGAGCAGAGATTTATAGCTTGGCTTTCTCTACAACTGCTCAGTGGCTAGCAGTCTCAAGTGACAAGGGCACTGTACATGTTTTCAGCTTGAAGGTCAATTCAGGATTACCAGCTAATGAAAATGTTCAAGCTTCTTCTGATAACAATGCTGCCGCTGCATCAGCGGGATCATCTCTTTCTTTTATTAAAGGAGTTCTGCCCAGATATTTCAGTTCAGAATGGTCCGTTGCTCAATTCCGTTTGATTGAAGGGGCACAATATATTGTTGCTTTTGGGCATCAGAAGAATACAGTGGTAATCCTTGGTATGGATGGAAGCTTCTATCGATGCCAATTTGATCCTGTGAAAGGTGGGGAGATGACTCAACTGGAATATCACAACTTTCTGAAGCCTGAGGAACCTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42326.p1 GENE.R_Transcript_42326~~R_Transcript_42326.p1 ORF type:complete len:452 (+),score=55.51 R_Transcript_42326:130-1485(+)
MATLSAWPNNPPNPNPISSPNFLHHNHQPPSPPAMASQESSSDHLYFDTTANSDADSDTSLPSLPKIIVSPQNPNPNPLPNPNPNLNPDSPNSIPSHQSSSLLHVSFNQDHGCFSSGTDRGFRIYNCDPFREIFRRDFDRGGGIGKVEMLFRCNILALVGGGSEPQYPVNKVMIWDDHQSRCIGELSFRSEVRGVRLRRDRIVVVLEQKVFVYNFTDLKLLHQIETIANPRGLCEVSQSAGKMVLVCPGLQKGQVRVEHYASKRTKFVMAHDSRIACFALTQDGGLLATASSKGTLVRVFNTYDGSLLQEVRRGADRAEIYSLAFSTTAQWLAVSSDKGTVHVFSLKVNSGLPANENVQASSDNNAAAASAGSSLSFIKGVLPRYFSSEWSVAQFRLIEGAQYIVAFGHQKNTVVILGMDGSFYRCQFDPVKGGEMTQLEYHNFLKPEEPF*

Click here to download the sequence:
Link to NCBI Protein BLAST