Transcript Information: R_Transcript_42339.p1


Annotated TAIR IDAT4G35785.5
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16953404-16955127 | Reverse length=244
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.554946688431
Replicate 24.554753000361
Replicate 37.9991782081802
Condition 2: 8 Hour
Replicate 18.5506195053872
Replicate 210.766350516126
Replicate 311.524832139928
Condition 3: 24 Hour
Replicate 110.689349397026
Replicate 25.4846410997732
Replicate 39.3804448658131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42339.p1 GENE.R_Transcript_42339~~R_Transcript_42339.p1 ORF type:complete len:189 (+),score=20.26,RRM_1|PF00076.18|1.2e-17,RRM_6|PF14259.2|4.4e-11 R_Transcript_42339:190-756(+)
ATGTCACATATGGGGGATGAAAGGTCACCTTCGCCGAATGGCTCTGCCTCGCCTGGTGATAGACGACATCGTTCCAGGTCAAGGTCATTACCCCGACGTAGTCCATCGAGGAGTCCTGAGGATGCATCTAATCCTGGAAACAATTTGTATGTTACTGGCATATCAACAAGGGTTACGACCAGTGATTTGGAGAAGTTCTTTGGCAAAGAAGGGAAGGTTCTTGACTGCAGTTTGGTCACAGATCCTCGTACCAAAGAATCCCGTGGCTTTGGGTTTGTTACTATGGATTCCGTTGAGGCTGCAAACCGATGTGTTAAGTATCTGAATCGCTCTGTTCTTGAAGGTCGATTAGTCACCGTGGAAAAGGTTTGTATATTTTATGTTTGTGCCCACAGAATCTTTTGGACTTTGTGCTTTCCCTTAAGGAATGTTGTTAATAAGTTTTGCCAGCAGGTTGTCATTGTAGCTCCATCGAATCCAATCTATGCTCTAACTGTCGACTTATCCCTTCACGACTTGAGCTCTGCATCAACATTGCTCATCGATTCAATCATTCAATTCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42339.p1 GENE.R_Transcript_42339~~R_Transcript_42339.p1 ORF type:complete len:189 (+),score=20.26,RRM_1|PF00076.18|1.2e-17,RRM_6|PF14259.2|4.4e-11 R_Transcript_42339:190-756(+)
MSHMGDERSPSPNGSASPGDRRHRSRSRSLPRRSPSRSPEDASNPGNNLYVTGISTRVTTSDLEKFFGKEGKVLDCSLVTDPRTKESRGFGFVTMDSVEAANRCVKYLNRSVLEGRLVTVEKVCIFYVCAHRIFWTLCFPLRNVVNKFCQQVVIVAPSNPIYALTVDLSLHDLSSASTLLIDSIIQFN*

Click here to download the sequence:
Link to NCBI Protein BLAST