Transcript Information: R_Transcript_4234.p1


Annotated TAIR IDAT5G38380.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15345660-15348217 | Forward length=361
E-Value1.1E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9165609002455
Replicate 20.83985201665192
Replicate 31.0308031918269
Condition 2: 8 Hour
Replicate 10.24485864947245
Replicate 20
Replicate 31.8151610620387
Condition 3: 24 Hour
Replicate 12.0662026504934
Replicate 20.88221035562309
Replicate 30.76606966404141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4234.p1 GENE.R_Transcript_4234~~R_Transcript_4234.p1 ORF type:complete len:200 (+),score=21.59 R_Transcript_4234:325-924(+)
ATGATGTCTCCTAGACCCATTTCCGAGGATCGTCACCCTGTTTATTCCAGGCAAACTCCCCTACGGATCATTCACTTCATCGGCAACTTCATGCGAGTATGGTCAATCTACTCCATGTACCACTATTTGTCTCAGTCTGGATCTTCAGTCGTTCTCTTTATCTTCAGTTGTCTGGTTCCAGCATCCATTGTGTTTTTAGCTTTACAAAAACCTTGGAAAGGGAGACCGCTTTCTAATACCCAGGTTGTACCTTCTATGATAAATGGTGCAATTACAGCATTGTACTTCATCCTGTGGGTGAAAGGGGTCAAATCATGTGGTCCGCTTAGAGCAATTCTTGCTGAGTATTCTGGTGCTGTACTTGGTGTACTGTCTGCTGTTTTGTATGGACGCAGGGGTCATATCTGGAAGAAGGTTGGTGGACTTGTTGCAATGCTGGCATCACTCTACTTTTTATCTCAAGGATGGGCCATGGCTTCTTTTTCTCCTTTCTATATCCTTAGCTCTATGATAGATTCTGTTTCCTTTTGGAACATATATTGTTCCTGTTCTTTTCTTCAGGGCAATCTGAAGAATGTTGCTAATTGCCTGTTGACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4234.p1 GENE.R_Transcript_4234~~R_Transcript_4234.p1 ORF type:complete len:200 (+),score=21.59 R_Transcript_4234:325-924(+)
MMSPRPISEDRHPVYSRQTPLRIIHFIGNFMRVWSIYSMYHYLSQSGSSVVLFIFSCLVPASIVFLALQKPWKGRPLSNTQVVPSMINGAITALYFILWVKGVKSCGPLRAILAEYSGAVLGVLSAVLYGRRGHIWKKVGGLVAMLASLYFLSQGWAMASFSPFYILSSMIDSVSFWNIYCSCSFLQGNLKNVANCLLT*

Click here to download the sequence:
Link to NCBI Protein BLAST