Transcript Information: R_Transcript_423630.p1


Annotated TAIR IDAT5G59600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24011315-24012919 | Reverse length=534
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.23772684414801
Replicate 20
Replicate 30.17622922932415
Condition 3: 24 Hour
Replicate 10.22289133230781
Replicate 20.42825745418597
Replicate 30.42500397450286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_423630.p1 GENE.R_Transcript_423630~~R_Transcript_423630.p1 ORF type:3prime_partial len:103 (-),score=15.41,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|3e-11,PPR|PF01535.16|7.8e-08,PPR|PF01535.16|9e-05,PPR|PF01535.16|4e+03,PPR_1|PF12854.3|4.1e-06,PPR_1|PF12854.3|1.2e-05,PPR_3|PF13812.2|5.1e-05,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|9.4e+02 R_Transcript_423630:2-307(-)
ATGGTCAGTTCATGGGTTTTGCGGCCTAATGTTGTAACTTGGAATACATTAATTGCTGGATTTTCGCAAGAAGGGGATCATTTAATGGTGGATGAGCTGTTTCGGTTGATGCGTGTTAATGGGATTGAGCCTGATGTGGTGTCCTGGACTTCTATAATATCCGGGCTGGTGAAGAATTTTCAGAATAGTGAAGCTTTTGTGACATTTCGCAAAATGTTGGATTCTAGGCTTTGCCCTAACGGGAATACAATTAGCTGTCTCTTGTCTGCTTGTGCTAATGTGGCCAATGTAACGCATGGGAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_423630.p1 GENE.R_Transcript_423630~~R_Transcript_423630.p1 ORF type:3prime_partial len:103 (-),score=15.41,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|3e-11,PPR|PF01535.16|7.8e-08,PPR|PF01535.16|9e-05,PPR|PF01535.16|4e+03,PPR_1|PF12854.3|4.1e-06,PPR_1|PF12854.3|1.2e-05,PPR_3|PF13812.2|5.1e-05,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|9.4e+02 R_Transcript_423630:2-307(-)
MVSSWVLRPNVVTWNTLIAGFSQEGDHLMVDELFRLMRVNGIEPDVVSWTSIISGLVKNFQNSEAFVTFRKMLDSRLCPNGNTISCLLSACANVANVTHGKE

Click here to download the sequence:
Link to NCBI Protein BLAST