Transcript Information: R_Transcript_42408.p1


Annotated TAIR IDAT5G05140.1
Annotated Gene NameTranscription elongation factor (TFIIS) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1520353-1522297 | Forward length=436
E-Value6E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5893890285409
Replicate 25.3043285262227
Replicate 33.6168533046556
Condition 2: 8 Hour
Replicate 15.2837919096687
Replicate 24.3544875164414
Replicate 34.9678092224217
Condition 3: 24 Hour
Replicate 13.6249169306901
Replicate 24.8753730179171
Replicate 34.723136274541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42408.p1 GENE.R_Transcript_42408~~R_Transcript_42408.p1 ORF type:5prime_partial len:190 (+),score=70.14,Med26|PF08711.7|6.1e-13 R_Transcript_42408:2-571(+)
GGTGGTGTTGGAAGTAAAGGGAGCAAAGTTAATAGTACTAGTAGGGAGGATGATCATGGTGGTGAAGATATGATGGAAATGAACAACAACAACAACAACAACAACCATGAGGGTAATTTTAGTTATGTTGATGCTGAGGCTTTGACTGATGAGATTGAAGAAGAAAGAGAAGTTGTTGAGGAAGTTTTGAGGATCAAGGACATCCTTCATAATAGCCAAGATGAGTCTGATGCAGTGTTGTTTGAGTGTTTGAGGAGGCTGCAATTGATGGCTTTGAATATTGATATCTTAAAGACAACTGAGATTGGGAAGGCTGTTAATGGAATCAGAAGACATAGTTCAAAGCAGATTCGTCATCTGGCTCGGTCACTGATTGATGGATGGAAGGTTATTGTAGACGAATGGGTCAAAGCCACGCAAGAAATAGCTGAAGGAGGTCATGCAGAGGGAGGTACACCAGATTCTGTTAACCCATCCACTGTTGATGAAGAAGAAGGTCTTCCTTCTCCTCCGATGGATGAAGGAGCTTTTTTTTGCCACTCAAACTATGGAGCTATCCCAGTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42408.p1 GENE.R_Transcript_42408~~R_Transcript_42408.p1 ORF type:5prime_partial len:190 (+),score=70.14,Med26|PF08711.7|6.1e-13 R_Transcript_42408:2-571(+)
GGVGSKGSKVNSTSREDDHGGEDMMEMNNNNNNNNHEGNFSYVDAEALTDEIEEEREVVEEVLRIKDILHNSQDESDAVLFECLRRLQLMALNIDILKTTEIGKAVNGIRRHSSKQIRHLARSLIDGWKVIVDEWVKATQEIAEGGHAEGGTPDSVNPSTVDEEEGLPSPPMDEGAFFCHSNYGAIPVL*

Click here to download the sequence:
Link to NCBI Protein BLAST