Transcript Information: R_Transcript_424082.p1


Annotated TAIR IDAT1G55650.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20796340-20798481 | Forward length=337
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.78459234530476
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_424082.p1 GENE.R_Transcript_424082~~R_Transcript_424082.p1 ORF type:3prime_partial len:114 (+),score=9.98,ARID|PF01388.17|7.1e-13 R_Transcript_424082:38-340(+)
ATGGAAGAACAAACCATGGAGGACAATACGTCTTCTCCGAATTTAATTGAAGAACGAGACCGAAGAAATTTCAATCAAGAAATTCATAAGTTCATGGCCGAAATTGGAAAGCCCTTAAGCAAAATCCCGATCATGGGTTACAAAGAGCTCGACCTTTACCAACTCTACAAAGAAGTCACAGCTCATGGTTGCTTCAATGAGGTAGTTAAAAATGTTGGTACCTGGAGCAAAATATGGAAACGACTTGGAAATTTTGACCCCTCCATTACCGATTCCTCATTCCGATTAAAGAAGAATTACGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_424082.p1 GENE.R_Transcript_424082~~R_Transcript_424082.p1 ORF type:3prime_partial len:114 (+),score=9.98,ARID|PF01388.17|7.1e-13 R_Transcript_424082:38-340(+)
MEEQTMEDNTSSPNLIEERDRRNFNQEIHKFMAEIGKPLSKIPIMGYKELDLYQLYKEVTAHGCFNEVVKNVGTWSKIWKRLGNFDPSITDSSFRLKKNYE

Click here to download the sequence:
Link to NCBI Protein BLAST