Transcript Information: R_Transcript_42410.p1


Annotated TAIR IDAT5G05140.1
Annotated Gene NameTranscription elongation factor (TFIIS) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1520353-1522297 | Forward length=436
E-Value4.2E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.362486921647
Replicate 226.273445440715
Replicate 334.972586009099
Condition 2: 8 Hour
Replicate 129.068780846462
Replicate 239.460379719739
Replicate 341.787531401479
Condition 3: 24 Hour
Replicate 135.664401067637
Replicate 224.767937791557
Replicate 331.54404498994


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42410.p1 GENE.R_Transcript_42410~~R_Transcript_42410.p1 ORF type:5prime_partial len:374 (+),score=115.76,Med26|PF08711.7|1.8e-12 R_Transcript_42410:2-1123(+)
GGTGGTGTTGGAAGTAAAGGGAGCAAAGTTAATAGTACTAGTAGGGAGGATGATCATGGTGGTGAAGATATGATGGAAATGAACAACAACAACAACAACAACAACAACAACAACAACCATGAGGGTAATTTTAGTTATGTTGATGCTGAGGCTTTGACTGATGAGATTGAAGAAGAAAGAGAAGTTGTTGAGGAAGTTTTGAGGATCAAGGACATCCTTCATAATAGCCAAGATGAGTCTGATGCAGTGTTGTTTGAGTGTTTGAGGAGGCTGCAATTGATGGCTTTGAATATTGATATCTTAAAGACAACTGAGATTGGGAAGGCTGTTAATGGAATCAGAAGACATAGTTCAAAGCAGATTCGTCATCTGGCTCGGTCACTGATTGATGGATGGAAGGTTATTGTAGACGAATGGGTCAAAGCCACGCAAGAAATAGCTGAAGGAGGTCATGCAGAGGGAGGTACACCAGATTCTGTTAACCCATCCACTGTTGATGAAGAAGAAGGTCTTCCTTCTCCTCCGATGGATGAAGGAGCTTTTTTTGCCACTCAAACTATGGAGCTATCCCAGTTCTTTGATGGCATGGATGATGATGGAAATCCTCGAAACTCTGGGGAATTCAACAAGAACCGGGAAGTTGGAAGAAGAGCTGATTTGGTTAAACAAGATGCTCCCAAGCGGAGAGAACCTCCTAAACAGGCAACTTCTGTACCCAAGGACAACAAGGTGCAGCCAACGAGAAGGCAAGAGCCTCTTCCAAAGCCGAACAGGCCCTCAAACGTGCAATCTGGTCCTGGCAGACCTGTAAAGCCTAACAGAGAGCAAAGAGTGTTCAAAGATTCTAAGGCTCAACAAAAGCCCGAGAAACCCATGATCCAAAGGAGGCCAGCTCCCCAAACCGAGAAGTTAGGAGTTTCAAATGAAGATGCAGTCCAAGAGAAGATAGAAGCGACAAAAAGGAAACTCCAAGAGCGATACCAACAAGCCGAGAATGCCAAGAGACAGAGGACTATACAAGTTATGGAATTACATGATCTCCCTAAGCAAGGGCTTGTAAATAAGAACACACAAGGAAGATTTGGAAACTTCAACCGGCAATGGGCAAATGGAAGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42410.p1 GENE.R_Transcript_42410~~R_Transcript_42410.p1 ORF type:5prime_partial len:374 (+),score=115.76,Med26|PF08711.7|1.8e-12 R_Transcript_42410:2-1123(+)
GGVGSKGSKVNSTSREDDHGGEDMMEMNNNNNNNNNNNNHEGNFSYVDAEALTDEIEEEREVVEEVLRIKDILHNSQDESDAVLFECLRRLQLMALNIDILKTTEIGKAVNGIRRHSSKQIRHLARSLIDGWKVIVDEWVKATQEIAEGGHAEGGTPDSVNPSTVDEEEGLPSPPMDEGAFFATQTMELSQFFDGMDDDGNPRNSGEFNKNREVGRRADLVKQDAPKRREPPKQATSVPKDNKVQPTRRQEPLPKPNRPSNVQSGPGRPVKPNREQRVFKDSKAQQKPEKPMIQRRPAPQTEKLGVSNEDAVQEKIEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQGLVNKNTQGRFGNFNRQWANGRR*

Click here to download the sequence:
Link to NCBI Protein BLAST