Transcript Information: R_Transcript_4242.p1


Annotated TAIR IDAT4G15030.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8578989-8581180 | Forward length=282
E-Value3.5E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5495368145395
Replicate 23.9722730517321
Replicate 35.3655421396393
Condition 2: 8 Hour
Replicate 15.0736476917715
Replicate 24.4990362863647
Replicate 34.9603500494151
Condition 3: 24 Hour
Replicate 14.2054842068767
Replicate 23.5765284687423
Replicate 34.2723747887337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4242.p1 GENE.R_Transcript_4242~~R_Transcript_4242.p1 ORF type:5prime_partial len:333 (+),score=49.53,Fra10Ac1|PF09725.5|8.9e+03,Fra10Ac1|PF09725.5|7.7e-51 R_Transcript_4242:1-999(+)
AACAGCGTAGAAAGAGAAATGGGCTTCAGTTTAGCGTTCAGTTCACTAACTACAAAACCTAGTCCCGAAATTTTGAACCAAACGATAAAAAAGTCTCATTTTTCATTTACTCGTCGTAGCAACCACCATCGCCCGGACCAAAAGCATCCCATGGCCTCCTTCGCTTCTCTGAAATCGGCGGTTTTCGACCGCGAAGAAAGAAAGCAGCATTATCAAGCTCATATCAGAGGCCTCAACGCCTACGCTAGGCACCAGAAATTCTTGAACGATTACGCCAAATACTATGGGAAAGGAAATACATCAGAAGAGAGGTTACCTGTTAAAACTGACCATGATGCTCTGAGAGAAGGATATCGGTTCATCCGTACTGAAGAAGATGACACGGATACATCCTGGGAGCAAAGGCTGGTCAAGCGTTACTACGATAAGCTCTTTAAAGAATATTGCATCGCTGACATGTCAAAATATAAGAGTGGCAAGATTGGCTTAAGGTGGAGAACAGAAAAGGAAGTCATTTCTGGAAAAGGGCAGTTCATATGTGGTAACAAGCATTGTGATGAAAGAGATGGCTTATCTAGCTATGAGGTAAATTTCTCTTACTTTGAGGCGGGAGAAAACAAGCAGGCTCTTGTGAAACTGGTTGCCTGTGAGAGGTGTGCAGCAAAACTCCAATATCGAAAAAAGAGTGAAAAACAGTTGGAGACCCAAGAGAAAGGGGAGTACAAAAGAAATAGGGATGTGCCAAGAAGTGATGGTGAGACAGATGATGAACATAAGAAACCAAGGTCAGAGGGCAGAGATCAGAAGGAGAAAGAACACTCCAGAACAAGAACATATTATTTCAGGAAAAGGTATAGTGGCGATGATGATACAGACGAAGAGGTCGAGAGTAGCAGAGAAAGAAAGAGAAGAGGGAGAAGCAGCTCGACATCGAGGGCCAATCACGGCAATGGAGATGATGAAAACTTTGACGAGTTTCTAGAGGGGATGTTTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4242.p1 GENE.R_Transcript_4242~~R_Transcript_4242.p1 ORF type:5prime_partial len:333 (+),score=49.53,Fra10Ac1|PF09725.5|8.9e+03,Fra10Ac1|PF09725.5|7.7e-51 R_Transcript_4242:1-999(+)
NSVEREMGFSLAFSSLTTKPSPEILNQTIKKSHFSFTRRSNHHRPDQKHPMASFASLKSAVFDREERKQHYQAHIRGLNAYARHQKFLNDYAKYYGKGNTSEERLPVKTDHDALREGYRFIRTEEDDTDTSWEQRLVKRYYDKLFKEYCIADMSKYKSGKIGLRWRTEKEVISGKGQFICGNKHCDERDGLSSYEVNFSYFEAGENKQALVKLVACERCAAKLQYRKKSEKQLETQEKGEYKRNRDVPRSDGETDDEHKKPRSEGRDQKEKEHSRTRTYYFRKRYSGDDDTDEEVESSRERKRRGRSSSTSRANHGNGDDENFDEFLEGMFP*

Click here to download the sequence:
Link to NCBI Protein BLAST