Transcript Information: R_Transcript_42421.p1


Annotated TAIR IDAT2G31650.1
Annotated Gene NameHomologue of trithorax
Annotated Gene Symbol(s)ATX1, SDG27
Annotation TypeHomolog
Chromosome Positionchr2:13455448-13462181 | Reverse length=1062
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6275648807973
Replicate 21.5979485272581
Replicate 31.8920019253459
Condition 2: 8 Hour
Replicate 12.210228517362
Replicate 22.1767230110889
Replicate 32.8378624273761
Condition 3: 24 Hour
Replicate 13.4538294059378
Replicate 22.1599840565403
Replicate 33.2024488273454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42421.p1 GENE.R_Transcript_42421~~R_Transcript_42421.p1 ORF type:complete len:1695 (+),score=312.33,zf-HC5HC2H_2|PF13832.2|3.2e+03,zf-HC5HC2H_2|PF13832.2|1.6e+04,zf-HC5HC2H_2|PF13832.2|7.5e+02,zf-HC5HC2H_2|PF13832.2|1.2e-15,SET|PF00856.24|1.1e+04,SET|PF00856.24|1.2e-14,zf-HC5HC2H|PF13771.2|6.8e+03,zf-HC5HC2H|PF13771.2|1.6e+04,zf-HC5HC2H|PF13771.2|6.4e+03,zf-HC5HC2H|PF13771.2|3.7e-15,zf-HC5HC2H|PF13771.2|1.6e+04,PHD_2|PF13831.2|4.5e-08,PHD_2|PF13831.2|4.6e+03 R_Transcript_42421:1235-6319(+)
ATGGATGTTTCCGACAGGCACAAGGTCTTTGACTTATCCAGTCTATTTACATCATCTGCAGAATCAGTCAAGTATGTGCAGCCTTGGAATAATATCATTGCAAGGAAACCCCAATCAATTGAGGAGTATGCTAATCAGATGCCAAAAAATAAACAATGGGAATATGGTTGTGATCAGCGCACCATTCCTATGGGTTTTGCAAGCGCCTCCAAAAGGAATTCACGTACTATGACCGATGATCCCATAACTAGCCCTACTCCTAGTTTTACTGCGGTTTCAAGGTTGGGCGGGAAAGGAGGATCAAAAGATGATCATCAGTCTAGGCCCCTTCACTTCAACATTATCTCCCCAAGTGCATTTTCATCTGGCGTTGAGCTAAAGCTTGGACAACCATCTCAACAGGGTTGTGGTTCAGGAACTACTGCTATATCAGCCATGAGATTGGGCATCAGGGATTTTCAAACAATCCCTCTCCAACAGCAACTTACTCAAAATTTGGAAAATTCTAAGGTCTTTGAGCATGGTGACCAGCGCCTTCATTGCCATTCTGGGTCTGTTTCAAGCAGAACCAAAGAACAATTTCTGCTGGATTTTCAGAAAAATGCACCAAGTACTGCAAACAATGCTTTTTGTGTAGGTCGCTTGAAAGATGGGTTGTCTAAAAGTTCTTTAGTTTCGGTGATAAGTCCTCCTAATAATAAAGCTGCACCAGTCAGCATGCATCATAAGGAAAATAGTGATATGATTAACAACCATGGTCATTATATTCCTTGGACACTACCTTTTCAACCTCATGGAGATAAATCTGCACTGGTGGACATTCCATATAACAGAGCTGATGGATCAATCAAGCCTTCAGGTATAAATAAATCAGCTTCAGGAATGAATAAGACCAGTACTTCGAATACAAAACGTGCAGACAATTGTTGCAACATGGGGAGTGAATCAAGCTTTAGGCTTTATGTGAAGCAAATGGAAAACTGTGGTTTCTTTATCCGAGATGGAAAAACTTTTGCTACAGTGCCCGGTGAGAAATACAATTCACTTCAGATGGCTGGTATGCTGCCGGAAATTTCTTATGCTTCAAGGTCTGTTGGGAAAGCATGTAGCCTGAAAAGCGATCGAGATCCAGATCACTCAAATTCATCCCTGGGATTCGGAAGATCTCCAACACTGCATGGAAGCTCTTCTGGTTGCAGTCCGTTGACAGGAGTCATGGGATCAGGTCATGATTCTGCTTCTCTAAATAATTACGTTGATGATGTACATCCACATGACTTTGATGAGAGTTTGAGAGTTGTTACTTTGAGGAATGTAGAGAAATCATTCAAGGAAAAGACAACAGATGCATGCCTCAGGGTGAATGAAAGGCCAAGGTCTTATTCTGACGAAAGACGAAAAAGGGAAAATTGCAGCATCTCTAATTTCAACTTGCAGGGTTCTTTTCTAAATCCGGGGCCTTCTACAGGAAATGATAAAAATCCCTTTAACACTGCACATAGTTACTCACCAACTTTCATGCATGATACTGGGTGCAGGAAAGCTGGTAACATTAGAGAAAGGACTAATGCAGAAGGTACAAACAACATGGCGGCTTTTGGTGCTTTTACTAGAGGAATTCCCTTCAATTCTGAGATGACTGGAAAGTGTAATCGAGGTACTTGTGTCCTTCAGCCAAAGGAACAGCTGTCACTGAGAGTTGAGACCGAGGTCAGTGGTTGTAACATGCTGCAAAGATGCTGTGAAGATTCATCTGCATATATATCAGGCAGGAACAATTCTATGGTTCAGACAATACATTCAAACAGGGAATTGCACTCCAGAGGTGAAAACACAATCAGGGGTTTGAAAAAGCAAGTAAGAGTTGGGGTGGTTGAAGCCACACAATTAAATGGCTCAAGATTTGTTGGTGATTCTTCGTCTACTGAAAAAACCATCTTAAGTGAATGCAATCAAAAGGTGAAGAAGCAACTTCATGGCCAGCTTGATTTTCAGGAGTCTCAATGGAGAGATGTTCCTTCCAAGTTGGATCCAATTTCCATGCTGAAATGTCCAGTTGCACCACATAAGTTTTTGGACAAGAGTGGAGGAGCTGAATCTCACTTGAAAGAACTCAGTGCTAAAGACATTTCCACATCAGATCAGGCAGCTATTTTGAAAGATAGAGAATTGTCGAACATTTCTTCTGGATGTTCTGCGCCAGCTATAACTCAGGCATCAATTACTGATGCTGGTGATACTGGATGTGTCAATGACCAGATAGCGGATCAAGGATCTGCTATTGATAGAAGCTGGTCATCTTTTGATGCTACTGATAGTGTTAAAAGTTCTCAACAGGCCTGTTGTGGTAAAGGTAGGTCAACTGAGGAAGAATCATTAGAAGTATCACCAAATGTAGAACGTCAGGAATTTATTGATGAATTTAAACAACAGCAATCAAAATCAAAGAAATCAAAAAAGTTGGGTGACTCTGGGGCTAATAATGGTAAGCCCTACAACATAACGCAGAAGTATGATGATGGATCCAAATCTAGAAAGAGAAAGAGTAGAGTAAAATGGATAACACTTGGTATATCACCGGAAGTCTCAGATGTCTCCTTGTTGCCACCAGAATCTCCATTGCATGCTGGTAATAGTAGTGATATTGATTCGGAAGATCATGGTTATAAAAGGAGGAGGTCTGGCTTGTCTTCAGTCAAAACGCGTTATCGTAAGAGAGATCTGAATGGTATATGTAATGTTGCGGTAGGTGAGACTGACAATAAGAGACCACTGAAGAGCAATGAAGACGTTGTAGCTAATCCAGAACGTGTTGCTCACAAAAGGTTAAAACAGTTTAAGCCTGTTGAATCAGTCATGAAACCAGCAAAGTCTACTGAACCTTCCAAACAAATTTGGATATATGACCCTGACTCTGATGAAACTTCAAGGTCCAGTCTCAACTGCTGCCCAAAAGGTGGGCTGGTTAGTGATGAGAATGTATGGAATCTGAAGGCAAGGCCTATAGCTAGTGGCAAGTATGGGATTATATGCGATCAGGAATTAGACCTAGACCAAATAAAGCCACCTAAGATTGTTCCTCTTAGTCAGGTTCTTAAATCTTCTAGAAGGCTTACTAAGTTTAAAAATCAAAATGGACTATCATCGACGAGAGATATGGTTTGGTCTAGTGCTGGTTGCAAATTTGTTGATACGTCAATTAGTTCCTGCACAAGGCAAGGTAATCAGTGCATTTTTGGTCTATCATGTCAAGGTGGGGATCATGGCACTTCGTGTCATGGAGCTATTCAAATGTACCACAAGGAAGAGGAAACTTCTATCAATTATTCATCTGTTTCTGAAAAACTTGGAGCTAATGGAAGTAAAAAGAAAATTTGTGTGTCAAGCCGTTGCACTACTACTCAATCAAAGCCAAAGAAGAGTCGTATGCGCAGTCTTTATGAATTATCTATGAGAGGAAATAAATTCATTTCTGTGAATTTTACTCTCTTCCAAAATGTGATGTGTGCACAATCGACAAAATTTGAATTTGAAAGGAAGGCATCTGAAGATACTATGAAAATTGATGCTGGTAAATGTAGAGCTAGTACCAGAAGATCCCTTGCAAAACCACCTTGTGACTCCTTTATCTCAGAGGCGGATGCATTATGCTGCGTTTGTGGAATACCAAACAGAGAAAGCACCAATTGTTTGTTGGAGTGTTGTCAATGTTTAATTCGGATTCATCAGGCATGCTATGGGGTCTCTAGATTGCCAAACGGTGATTGGTATTGCAGACCATGCAGGACAAATTCCAAGGATGTAGCTTGTGTCTTATGTGGTTATGGAGGTGGAGCCATGACTCGCGCATTTGGCAGCAGAAATGTTGTGAAAAGTCTTTTGCAAGCGTGGAATGTTAGTACAGAAGCTCATGTTATGGGTTTAGGCTCTGGTGATGCCTTGAGTGTGAAGGTGGAGTGTGAAAAGCTGGATAGTTCGAAATTTCAGCTTTCTTTGGTGAAACCAGTGGTGCATAACAGCATAATAGGCGCAGTAGATAATCCGGCCATCAAGCAGTGGGTCCATATGGTGTGTGGACTATGGACTCCTGGAACTCGATGCCCTAATGTGGACATAATGAGTGCTTTTGATGTTTCTGGTGTTTCCTGCCAAAAAGCACACATGGTGTGCTCCATTTGCAAAAGACCTGGTGGGTCATGCATAAAATGTCATCTTGAGACTTGTAGAATTCACTTTCATCCGTGGTGTGCTCATCAAAAGGGTTTGCTTCAAAGTGAAGTTGAAGGTGTTGATAGTCATCAGGTTGGTTTCTATGGAATATGTTCACATCATACTAACTACCAACCTCGTGGAGTTGAGAGTGATCGTGAACCTGATAAGATTGATTATGAGACTGAACGAGAAAAGGAGCCAACTTGTGCCAGAACACAGGGTTACAAGGGTAAGAAGCAGGATGGTGAAGGGCATAATTGTTATCAAAAAAGTGGCAAGAATGGATGCCTTGTTACTCAGGTGCAATTAGATGCGTGGCTTTACATCAATAGACAAAAGTTGAAAATGAAAAAGCTGCCTGTACCTCCTCTTTCAGATGTAGATCAAGATTATCGGAAAGAATATGCTCGATATAAACAAGCAAAGGGTTGGAAACATTTGGTAGTGTATAAATCTGGAATTCATGGTCTTGGTCTTTACACATCTCAGTTTTTCCCTCGCGGTGCTGTGGTTGTCGAGTATATTGGTGAGGTAGTGGGGCCCCGTGTTGCTGATAAAAGAGAGACTGAATATTTGTCCGGAAAGAAGCTTCAATACAAGAGTGCTTGCTACTTCTTTAGAATTGACAAGGAGCGGATTATTGATGCAACCTGCAAAGGGGGGATAGCCCGGTTTGTCAACCACTCTTGCCAGCCAAATTGTGTGGCGAAAGTGATGACCATCAGGAGCGAGAAGAAGGTTGTGTTTTTCGCTCAGAGAGCTATCTACCCTGGGGAAGAGATCACCTATGATTATCATTTCAATCATGAGGATGAAGGCAAGAAAATCCCATGTTTCTGCAATTCTAAGAACTGCAGGCGTTTTTTGAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42421.p1 GENE.R_Transcript_42421~~R_Transcript_42421.p1 ORF type:complete len:1695 (+),score=312.33,zf-HC5HC2H_2|PF13832.2|3.2e+03,zf-HC5HC2H_2|PF13832.2|1.6e+04,zf-HC5HC2H_2|PF13832.2|7.5e+02,zf-HC5HC2H_2|PF13832.2|1.2e-15,SET|PF00856.24|1.1e+04,SET|PF00856.24|1.2e-14,zf-HC5HC2H|PF13771.2|6.8e+03,zf-HC5HC2H|PF13771.2|1.6e+04,zf-HC5HC2H|PF13771.2|6.4e+03,zf-HC5HC2H|PF13771.2|3.7e-15,zf-HC5HC2H|PF13771.2|1.6e+04,PHD_2|PF13831.2|4.5e-08,PHD_2|PF13831.2|4.6e+03 R_Transcript_42421:1235-6319(+)
MDVSDRHKVFDLSSLFTSSAESVKYVQPWNNIIARKPQSIEEYANQMPKNKQWEYGCDQRTIPMGFASASKRNSRTMTDDPITSPTPSFTAVSRLGGKGGSKDDHQSRPLHFNIISPSAFSSGVELKLGQPSQQGCGSGTTAISAMRLGIRDFQTIPLQQQLTQNLENSKVFEHGDQRLHCHSGSVSSRTKEQFLLDFQKNAPSTANNAFCVGRLKDGLSKSSLVSVISPPNNKAAPVSMHHKENSDMINNHGHYIPWTLPFQPHGDKSALVDIPYNRADGSIKPSGINKSASGMNKTSTSNTKRADNCCNMGSESSFRLYVKQMENCGFFIRDGKTFATVPGEKYNSLQMAGMLPEISYASRSVGKACSLKSDRDPDHSNSSLGFGRSPTLHGSSSGCSPLTGVMGSGHDSASLNNYVDDVHPHDFDESLRVVTLRNVEKSFKEKTTDACLRVNERPRSYSDERRKRENCSISNFNLQGSFLNPGPSTGNDKNPFNTAHSYSPTFMHDTGCRKAGNIRERTNAEGTNNMAAFGAFTRGIPFNSEMTGKCNRGTCVLQPKEQLSLRVETEVSGCNMLQRCCEDSSAYISGRNNSMVQTIHSNRELHSRGENTIRGLKKQVRVGVVEATQLNGSRFVGDSSSTEKTILSECNQKVKKQLHGQLDFQESQWRDVPSKLDPISMLKCPVAPHKFLDKSGGAESHLKELSAKDISTSDQAAILKDRELSNISSGCSAPAITQASITDAGDTGCVNDQIADQGSAIDRSWSSFDATDSVKSSQQACCGKGRSTEEESLEVSPNVERQEFIDEFKQQQSKSKKSKKLGDSGANNGKPYNITQKYDDGSKSRKRKSRVKWITLGISPEVSDVSLLPPESPLHAGNSSDIDSEDHGYKRRRSGLSSVKTRYRKRDLNGICNVAVGETDNKRPLKSNEDVVANPERVAHKRLKQFKPVESVMKPAKSTEPSKQIWIYDPDSDETSRSSLNCCPKGGLVSDENVWNLKARPIASGKYGIICDQELDLDQIKPPKIVPLSQVLKSSRRLTKFKNQNGLSSTRDMVWSSAGCKFVDTSISSCTRQGNQCIFGLSCQGGDHGTSCHGAIQMYHKEEETSINYSSVSEKLGANGSKKKICVSSRCTTTQSKPKKSRMRSLYELSMRGNKFISVNFTLFQNVMCAQSTKFEFERKASEDTMKIDAGKCRASTRRSLAKPPCDSFISEADALCCVCGIPNRESTNCLLECCQCLIRIHQACYGVSRLPNGDWYCRPCRTNSKDVACVLCGYGGGAMTRAFGSRNVVKSLLQAWNVSTEAHVMGLGSGDALSVKVECEKLDSSKFQLSLVKPVVHNSIIGAVDNPAIKQWVHMVCGLWTPGTRCPNVDIMSAFDVSGVSCQKAHMVCSICKRPGGSCIKCHLETCRIHFHPWCAHQKGLLQSEVEGVDSHQVGFYGICSHHTNYQPRGVESDREPDKIDYETEREKEPTCARTQGYKGKKQDGEGHNCYQKSGKNGCLVTQVQLDAWLYINRQKLKMKKLPVPPLSDVDQDYRKEYARYKQAKGWKHLVVYKSGIHGLGLYTSQFFPRGAVVVEYIGEVVGPRVADKRETEYLSGKKLQYKSACYFFRIDKERIIDATCKGGIARFVNHSCQPNCVAKVMTIRSEKKVVFFAQRAIYPGEEITYDYHFNHEDEGKKIPCFCNSKNCRRFLN*

Click here to download the sequence:
Link to NCBI Protein BLAST