Transcript Information: R_Transcript_424568.p1


Annotated TAIR IDAT5G58420.1
Annotated Gene NameRibosomal protein S4 (RPS4A) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23619599-23620896 | Forward length=262
E-Value2E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.388057867279
Replicate 21.197507628306
Replicate 30.69678289265863
Condition 2: 8 Hour
Replicate 10.27930644426515
Replicate 20.25506709324546
Replicate 30.20705259262799
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.083223211737252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_424568.p1 GENE.R_Transcript_424568~~R_Transcript_424568.p1 ORF type:complete len:263 (+),score=34.64,Ribosomal_S4e|PF00900.16|1.5e-35,RS4NT|PF08071.8|2.8e-20,40S_S4_C|PF16121.1|5.6e+03,40S_S4_C|PF16121.1|4.1e+03,40S_S4_C|PF16121.1|2.7e-18,S4|PF01479.21|3.1e-09,S4|PF01479.21|4.8e+03 R_Transcript_424568:14-802(+)
ATGCCAAGAGGACCTAAATTTCACTTAAAGAGATTAGCTGCTCCATCCCACTGGATGCTTGATAAGCTTGGAGGAAAATTCGCACCAAGACCATCCGCTGGTCCACACAAATTGCGTGAATGCTTGCCACTTGTTATCTTGTTGAGACAAAGACTTAAATATGCATTGTCCAGAAGAGATGTCACCAAAATTGTCATGCAAAGATTGATCAGAGTTGATGGAAAGATCAGAACTGATATCAACTACCCATCCGGATTCATGGATGTCGTCAGCATCCCAAAAACTAAGGAACACTTCCGTCTTATCTATGATGTCAAGGGAAGATTCCAAGTTCACAGAATCTCTGATAAGGAGGCTGAATTCAAGCTCGTTAAGATTAGAAAGATCGCAACTGGTCCTAAGGCTATCCCATACTTGGTTACACACGACGGAAGAACCATCCGTTATCCTGATCCTAACTACAAGGTCAACGACACCCTCAAGATCAACATCAAAACCGGAAAGATCTTGGAGCACGTCAAGTTCGAAGTCGGAAACTTGATCATGGTTACCGGAGGACGTAACTTGGGTCGTGTCGGGGTTCTCGAAAAACAAGAGAAGCACCCTGGATCATTCGATATTGTCCACGTTAAGGATGCAACTGGTGTTAAGTTTGCAACCAGACTTCAAAACATTTTCATCATCGGAAGAGGACATGATGCACTCGTCTCTCTCCCAGCAAGAAAGGGTATCCACTTGTCCATTCTTGAACAAAGAGAATATGATGCAAAGAAAAAGACCAAAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_424568.p1 GENE.R_Transcript_424568~~R_Transcript_424568.p1 ORF type:complete len:263 (+),score=34.64,Ribosomal_S4e|PF00900.16|1.5e-35,RS4NT|PF08071.8|2.8e-20,40S_S4_C|PF16121.1|5.6e+03,40S_S4_C|PF16121.1|4.1e+03,40S_S4_C|PF16121.1|2.7e-18,S4|PF01479.21|3.1e-09,S4|PF01479.21|4.8e+03 R_Transcript_424568:14-802(+)
MPRGPKFHLKRLAAPSHWMLDKLGGKFAPRPSAGPHKLRECLPLVILLRQRLKYALSRRDVTKIVMQRLIRVDGKIRTDINYPSGFMDVVSIPKTKEHFRLIYDVKGRFQVHRISDKEAEFKLVKIRKIATGPKAIPYLVTHDGRTIRYPDPNYKVNDTLKINIKTGKILEHVKFEVGNLIMVTGGRNLGRVGVLEKQEKHPGSFDIVHVKDATGVKFATRLQNIFIIGRGHDALVSLPARKGIHLSILEQREYDAKKKTKK*

Click here to download the sequence:
Link to NCBI Protein BLAST