Transcript Information: R_Transcript_42473.p2


Annotated TAIR IDAT5G24490.1
Annotated Gene Name30S ribosomal protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8365690-8367178 | Forward length=308
E-Value7.1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.210782750214
Replicate 211.987507158094
Replicate 311.49299983198
Condition 2: 8 Hour
Replicate 127.620733469903
Replicate 233.580009408562
Replicate 330.838895552284
Condition 3: 24 Hour
Replicate 19.2943371821501
Replicate 27.021051273125
Replicate 39.6184723018545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42473.p2 GENE.R_Transcript_42473~~R_Transcript_42473.p2 ORF type:complete len:289 (+),score=77.09,Ribosom_S30AE_C|PF16321.1|3e-25,Ribosomal_S30AE|PF02482.15|1.6e-21 R_Transcript_42473:1413-2279(+)
ATGGCAACTTTATCTTTGAATTTGGTAGTACCCACAAAACCTCAGCTATGTAATCTGTCTTCTGTGGGTTCAAGCTTTATTAATATATCTTCATTGAGCAAATTGAAGCCAGTTTCAGCTTCTATTAAGACTATACAACCTGTGAAGTTGCCTGTTGTTCGTATGTCATGGGATGGTCCTTTGTCTTCTGTCAAACTTATCCTTCAGGGCCGCAATCTTGAGTTGACAGATAATGTTAGGAGTTATGTTGAAGAAAAGGTTGGAAAATCTGTTAAGAATCACAGCCATTTGGTGAGGGAAGTAGATGTGCGTCTGTCTGCTCGAGGTGGAGAGCTTGGAAAAGGGCCAAAGCTTAGGAGATGCGAGGTCACTTTATTCACCAAGAAGCATGGGGTAGTTCGAGCAGAGGAAGATGCTGAGAGCCTCTATGGTAGTATTGATATGGTCTCCTCAATTCTGCAGAGGAAATTGAGGAAGATTAAGGACAAGGAATCTGACCATGGTCGCCACATGAAAGGGTTCAACCGTTCGAAGGTGAGGGAGCCTGAGCCAATAGTCATACCTAGAGACGAGGAAGAAATTCCCCAAGTGGAAACTCCAATTGAAGATGAGAAGGACTTCATGGAAGAGATTGTTCGGACAAAGTACTTTGACATGCCGCCGCTGACAGTCACAGAAGCCATTGAACAGCTTGAAAATGTTGATCATGATTTCTATGCTTTCCGAAATGAAGAAACTAGTGAGATAAACATTTTATACAAGAGAAAAGAGGGGGGCTATGGGCTTATCATTCCCAAGGAGGGCAAGACGGAAAAGTTGGAGCCTCTGCTTGTCGAACCCGACAGAGAACACTCTATGGCTGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42473.p2 GENE.R_Transcript_42473~~R_Transcript_42473.p2 ORF type:complete len:289 (+),score=77.09,Ribosom_S30AE_C|PF16321.1|3e-25,Ribosomal_S30AE|PF02482.15|1.6e-21 R_Transcript_42473:1413-2279(+)
MATLSLNLVVPTKPQLCNLSSVGSSFINISSLSKLKPVSASIKTIQPVKLPVVRMSWDGPLSSVKLILQGRNLELTDNVRSYVEEKVGKSVKNHSHLVREVDVRLSARGGELGKGPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDMVSSILQRKLRKIKDKESDHGRHMKGFNRSKVREPEPIVIPRDEEEIPQVETPIEDEKDFMEEIVRTKYFDMPPLTVTEAIEQLENVDHDFYAFRNEETSEINILYKRKEGGYGLIIPKEGKTEKLEPLLVEPDREHSMAE*

Click here to download the sequence:
Link to NCBI Protein BLAST