Transcript Information: R_Transcript_42478.p1


Annotated TAIR IDAT5G24490.1
Annotated Gene Name30S ribosomal protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8365690-8367178 | Forward length=308
E-Value3.8E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34310076982554
Replicate 20
Replicate 32.2390044266916
Condition 2: 8 Hour
Replicate 11.6569382295128
Replicate 20.67250772454693
Replicate 30.47767396369439
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.32913841634432


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42478.p1 GENE.R_Transcript_42478~~R_Transcript_42478.p1 ORF type:complete len:266 (+),score=71.96,Ribosomal_S30AE|PF02482.15|1.3e-21,Ribosom_S30AE_C|PF16321.1|3.5e-15 R_Transcript_42478:1408-2205(+)
ATGGCAACTTTATCTTTGAATTTGGTAGTACCCACAAAACCTCAGCTATGTAATCTGTCTTCTGTGGGTTCAAGCTTTATTAATATATCTTCATTGAGCAAATTGAAGCCAGTTTCAGCTTCTATTAAGACTATACAACCTGTGAAGTTGCCTGTTGTTCGTATGTCATGGGATGGTCCTTTGTCTTCTGTCAAACTTATCCTTCAGGGCCGCAATCTTGAGTTGACAGATAATGTTAGGAGTTATGTTGAAGAAAAGGTTGGAAAATCTGTTAAGAATCACAGCCATTTGGTGAGGGAAGTAGATGTGCGTCTGTCTGCTCGAGGTGGAGAGCTTGGAAAAGGGCCAAAGCTTAGGAGATGCGAGGTCACTTTATTCACCAAGAAGCATGGGGTAGTTCGAGCAGAGGAAGATGCTGAGAGCCTCTATGGTAGTATTGATATGGTCTCCTCAATTCTGCAGAGGAAATTGAGGAAGATTAAGGACAAGGAATCTGACCATGGTCGCCACATGAAAGGGTTCAACCGTTCGAAGGTGAGGGAGCCTGAGCCAATAGTCATACCTAGAGACGAGGAAGAAATTCCCCAAGTGGAAACTCCAATTGAAGATGAGAAGGACTTCATGGAAGAGATTGTTCGGACAAAGTACTTTGACATGCCGCCGCTGACAGTCACAGAAGCCATTGAACAGCTTGAAAATGTTGATCATGATTTCTATGCTTTCCGAAATGAAGAAACTAGTATGCCATATTTTGCTTCATACTTTGTCAAATACTTCCTTTGCAACCAGCTTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42478.p1 GENE.R_Transcript_42478~~R_Transcript_42478.p1 ORF type:complete len:266 (+),score=71.96,Ribosomal_S30AE|PF02482.15|1.3e-21,Ribosom_S30AE_C|PF16321.1|3.5e-15 R_Transcript_42478:1408-2205(+)
MATLSLNLVVPTKPQLCNLSSVGSSFINISSLSKLKPVSASIKTIQPVKLPVVRMSWDGPLSSVKLILQGRNLELTDNVRSYVEEKVGKSVKNHSHLVREVDVRLSARGGELGKGPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDMVSSILQRKLRKIKDKESDHGRHMKGFNRSKVREPEPIVIPRDEEEIPQVETPIEDEKDFMEEIVRTKYFDMPPLTVTEAIEQLENVDHDFYAFRNEETSMPYFASYFVKYFLCNQLC*

Click here to download the sequence:
Link to NCBI Protein BLAST