Transcript Information: R_Transcript_424834.p1


Annotated TAIR IDAT3G53230.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19723416-19726489 | Forward length=815
E-Value3.4E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.69987668054327
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_424834.p1 GENE.R_Transcript_424834~~R_Transcript_424834.p1 ORF type:internal len:90 (+),score=19.30,AAA|PF00004.25|4.7e-30,RuvB_N|PF05496.8|6.1e-07,AAA_16|PF13191.2|5.3e-05,AAA_16|PF13191.2|29 R_Transcript_424834:2-268(+)
GAACATCCAGATAAATATACCAAGTTTGGAATGAGTCCTTCTAAAGGAGTGTTGTTTTATGGTCCTCCTGGATGTGGTAAAACTTTGTTGGCTAAGGCTATTGCTAATGAATGTCAATCCAACTTCATTTCAATCAAGGGACCTGAACTCTTGACTATGTGGTTTGGAGAATCTGAAGCCAATGTTCGTGACATCTTTGACAAGGCTCGTTCTGCCGCTCCTTGTGTTCTTTTCTTTGACGAACTCGATGCCATTGCCAAAGCTCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_424834.p1 GENE.R_Transcript_424834~~R_Transcript_424834.p1 ORF type:internal len:90 (+),score=19.30,AAA|PF00004.25|4.7e-30,RuvB_N|PF05496.8|6.1e-07,AAA_16|PF13191.2|5.3e-05,AAA_16|PF13191.2|29 R_Transcript_424834:2-268(+)
EHPDKYTKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQSNFISIKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDAIAKAR

Click here to download the sequence:
Link to NCBI Protein BLAST