Transcript Information: R_Transcript_42495.p1


Annotated TAIR IDAT3G28480.2
Annotated Gene NameOxoglutarate/iron-dependent oxygenase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10676266-10678262 | Reverse length=324
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.627558254051
Replicate 246.05640091317
Replicate 350.862809823715
Condition 2: 8 Hour
Replicate 133.700975411262
Replicate 247.005939784428
Replicate 341.963400896593
Condition 3: 24 Hour
Replicate 133.572707343739
Replicate 243.161904495538
Replicate 348.717794303094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42495.p1 GENE.R_Transcript_42495~~R_Transcript_42495.p1 ORF type:5prime_partial len:186 (+),score=34.61,ShK|PF01549.20|8.9e+03,ShK|PF01549.20|2.1e-11 R_Transcript_42495:1-558(+)
CTTATTTCCCCCTGTAAAAACATTGAAGTTTTCCCATCAAACCCACCTCTCTCTCCATCTCTCATTTCTTCTTGTTCTTCACTTGCAAATCCAGCTCATCGTCGATTATCAATGGTTGAGTTTCAAGTTTTGCTTACACTTTCCGTCTTTCTTCTTCTATTTTTCCCTTATACTTCTCATGGGGGCCGGCTCAACAATCTGCACAGGAGTGGATCAGGGCTGCTATTAAAAAGTGAAGATGCTGTTGATTCAAGGGATGTTTCTCAACAAGGATCAGTGAAACCGAACAAGAGAGATGCTTTGCCATTCTTCAATTTGCATCGTGATGCAACAACTGATCCAATGAGCCCCCTTGTTATTAAGGTTGAGAGACGGTTTGCAAGTGAGTCGATTCGTGTTCGGTCTATTGACAAATCCTTGCAACAAGATACAGTTTCTATAGGTTGTATGGATGATAAGTTGTACTGTGCTCAGTGGGTGCGTTCAGGTTTCTGTACTAGTCAGTTTTACACTCACATCATGAAGGAAATTTGTAGAAAGAGTTGCGGCTTTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42495.p1 GENE.R_Transcript_42495~~R_Transcript_42495.p1 ORF type:5prime_partial len:186 (+),score=34.61,ShK|PF01549.20|8.9e+03,ShK|PF01549.20|2.1e-11 R_Transcript_42495:1-558(+)
LISPCKNIEVFPSNPPLSPSLISSCSSLANPAHRRLSMVEFQVLLTLSVFLLLFFPYTSHGGRLNNLHRSGSGLLLKSEDAVDSRDVSQQGSVKPNKRDALPFFNLHRDATTDPMSPLVIKVERRFASESIRVRSIDKSLQQDTVSIGCMDDKLYCAQWVRSGFCTSQFYTHIMKEICRKSCGFC*

Click here to download the sequence:
Link to NCBI Protein BLAST