Transcript Information: R_Transcript_42496.p1


Annotated TAIR IDAT3G28480.2
Annotated Gene NameOxoglutarate/iron-dependent oxygenase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10676266-10678262 | Reverse length=324
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2413350361296
Replicate 25.8247801154891
Replicate 36.6503431730765
Condition 2: 8 Hour
Replicate 12.3695998336044
Replicate 25.4820226449358
Replicate 33.7474292893702
Condition 3: 24 Hour
Replicate 19.3312377764217
Replicate 29.9604394989704
Replicate 39.8847698585988


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42496.p1 GENE.R_Transcript_42496~~R_Transcript_42496.p1 ORF type:complete len:155 (+),score=37.38,ShK|PF01549.20|3.4e-10 R_Transcript_42496:111-575(+)
ATGGTTAAGGAGTTTCAAGTTTTGCGTACACTTTCCGTCTTTGTTCTTCTGTTTTTCCCTTATACTTCTCATGGGGGCCGGCTCAACAATCTGCACAGGAGTGGATCAGTGCTGCGATTGAAAAGTGAAGATGCTGTTGATTCAAGGGATGTTTCTCAACAAGGATCAGTGAAACCCAAGAAGGGAGTTGCTTTGTCATTCTTCAGTTTGCACCGTGGTGCAAGGACTGATACAATGAGCTTGCATGCCAGATGCCCCCCAGTTATTGAGGTTGAGAGATGGTCTGCAACTGAGTGGATTCGTTTTCGGTCTATTGACAAATCATTGCAAGAAGATAAAGTTTCTAAAGGTTGTAAGGATGATGGTAAGAACTGTGCTCAGTGGGCACGTTCAGGTTTCTGTAGTAGTCCTCTTTACAAGGAGTGCATGAAGAAATTTTGTAGAAAGAGTTGCGGCTTTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42496.p1 GENE.R_Transcript_42496~~R_Transcript_42496.p1 ORF type:complete len:155 (+),score=37.38,ShK|PF01549.20|3.4e-10 R_Transcript_42496:111-575(+)
MVKEFQVLRTLSVFVLLFFPYTSHGGRLNNLHRSGSVLRLKSEDAVDSRDVSQQGSVKPKKGVALSFFSLHRGARTDTMSLHARCPPVIEVERWSATEWIRFRSIDKSLQEDKVSKGCKDDGKNCAQWARSGFCSSPLYKECMKKFCRKSCGFC*

Click here to download the sequence:
Link to NCBI Protein BLAST