Transcript Information: R_Transcript_425322.p1


Annotated TAIR IDAT3G61470.1
Annotated Gene Namephotosystem I light harvesting complex gene 2
Annotated Gene Symbol(s)LHCA2
Annotation TypeOrtholog
Chromosome Positionchr3:22745736-22747032 | Forward length=257
E-Value6.7E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26842589639292
Replicate 20.61753824753818
Replicate 30.084215947044678
Condition 2: 8 Hour
Replicate 10.27006468691815
Replicate 20.082209124416124
Replicate 30.066733862574952
Condition 3: 24 Hour
Replicate 10.16880740608606
Replicate 20.24325653188137
Replicate 30.080469502525358


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_425322.p1 GENE.R_Transcript_425322~~R_Transcript_425322.p1 ORF type:complete len:272 (+),score=-17.18,Chloroa_b-bind|PF00504.17|4.4e-51 R_Transcript_425322:25-816(+)
ATGGCGCTCGTCTCCGCCTCCTCCTCCACCACCGCCGTCGCGGCGCTCCCCGGCGCCGCCAGGGCCTCCTCCTTCCTCGGCGGCGCCGGCAGGAGCGGCAGGCTGCTGCTGAGGCAGGCCGAGTCGTCGTCCGCGCGGGCGTCGTTCGCCGTGCGCGCCGCGGCGCCCGACAGGCCAATCTGGTTCCCCGGCAGCACCCCGCCGCCGTGGCTCGACGGCAGCCTCCCCGGCGACTTCGGCTTCGACCCCCTGGGTCTCGGATCGGACCCGGAGAGCTTGCGGTGGAACGTGCAGGCGGAGCTGGTGCACTGCCGGTGGGCGATGCTGGGCGCGGCGGGCATCTTCATCCCGGAGTTCCTGACCAAGATCGGCATCCTCAACACGCCGTCGTGGTACACCGCCGGCGAGCAGCAATACTTCACCGACACCACCACCCTCTTCATCATCGAGCTCATCCTCATCGGCTGGGCCGAGGGCCGCCGGTGGGCTGACATCATCAAGCCCGGCTGCGTCAACACCGACCCCATCTTCCCCAACAACAAGCTCACCGGCACCGACGTCGGGTACCCTGGTGGTCTGTGGTTTGACCCGCTCGGCTGGGGCACCGGCTCGCCGGAGAAGATCAAGGAGCTGCGCACCAAGGAGATCAAGAACGGGCGGCTCGCCATGCTCGCCGTCATGGGAGCTTGGTTCCAGGCAGAGTACACCGGCACCGGCCCCATCGACAACCTCTTCGCCCATCTCGCCGACCCCGGCCACGCCACCATCTTCCAGGCCTTCACCCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_425322.p1 GENE.R_Transcript_425322~~R_Transcript_425322.p1 ORF type:complete len:272 (+),score=-17.18,Chloroa_b-bind|PF00504.17|4.4e-51 R_Transcript_425322:25-816(+)
MALVSASSSTTAVAALPGAARASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFQAFTPK*

Click here to download the sequence:
Link to NCBI Protein BLAST