Transcript Information: R_Transcript_42557.p1


Annotated TAIR IDAT3G18560.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6393984-6394571 | Forward length=195
E-Value6.1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.053041368018
Replicate 224.276972356345
Replicate 337.223448593748
Condition 2: 8 Hour
Replicate 115.303665592028
Replicate 222.884965009338
Replicate 320.704180863879
Condition 3: 24 Hour
Replicate 143.942677896777
Replicate 227.052153482974
Replicate 354.89025941011


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42557.p1 GENE.R_Transcript_42557~~R_Transcript_42557.p1 ORF type:complete len:128 (+),score=6.39 R_Transcript_42557:189-572(+)
ATGAAGATGAAAATGGCACAAAATCAAACACAAAGGCAAATAGTGAACTACTCAAAGCTAGTAGGGCTAGGCTTCCTAGAGTCAATCGCGGCTTTAGCCTATTTATGCACCAAATACACGCGTAAAGCCTCCCAAAAACTTGCTAGAGCCGCTGTTAAGCGTTTGATGATGGGGAGTCATTGTAATAGTAACAAAACCGGTGATGAAAGCTTTGGCAGTGATAATAACGTTGTATGGCGAAAGAACATCCTTATAGGGGATAAGTGTGAACCCCTTGATTTTTCTGGTGTCATTTATTATGATTCTGATGGAAAGTTAGTTTCCGAGATTCCTACTAAGTCGCCACGTGCCCGTTGGTCTGCTTATCCAACGGCTGAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42557.p1 GENE.R_Transcript_42557~~R_Transcript_42557.p1 ORF type:complete len:128 (+),score=6.39 R_Transcript_42557:189-572(+)
MKMKMAQNQTQRQIVNYSKLVGLGFLESIAALAYLCTKYTRKASQKLARAAVKRLMMGSHCNSNKTGDESFGSDNNVVWRKNILIGDKCEPLDFSGVIYYDSDGKLVSEIPTKSPRARWSAYPTAEI*

Click here to download the sequence:
Link to NCBI Protein BLAST