Transcript Information: R_Transcript_425649.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2570909748429
Replicate 21.9665956312786
Replicate 31.5144950476795
Condition 2: 8 Hour
Replicate 12.5632585895188
Replicate 23.3880124001796
Replicate 31.7001508570059
Condition 3: 24 Hour
Replicate 13.415210992551
Replicate 21.7012320907332
Replicate 32.2309781636782


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_425649.p1 GENE.R_Transcript_425649~~R_Transcript_425649.p1 ORF type:complete len:363 (+),score=37.43,PIF1|PF05970.10|3.1e-61 R_Transcript_425649:759-1847(+)
ATGGCGAGGAAAGAAAACGTAGAAGCTGTCGATCGGCTATTACGTGACATCTGCAACAGCCCACAACCATTTGGAGGCAAAGTATTTGTGTTTGGTGGAGATTTCAGGCAAGTGTTGCCTGTTATTCCTAAACGAGCACAGCATGAGCTTGTCGATGCTAGCCTTGTTAGCTCCTATCTATGGCCACTTTTCCATCGATTCACGCTTGTTGAGAATATGCGTGCCAAAGAGGACACTGAATTCACAGCTTTCCTGCTTAGGCTCGGCAATGGTGAATTTCAGAACACCGAGCACGCTTGTATTACATTGCCACCTTCTTTGCTCTTTAAACTCCCACCAACTGAAAACTGCTTGGATTATCTTGTCGAATCAGTGTACACTGATATCAATGAATTGGCACGTAATCCTCATGCCTTTACTGCGCGAGCAACATTGACTCCAACGAATGATGAAGTGGATTGTATCAACCAAATTGTGATAGACAAATTCCCTGGACAACCATATGTTTATAAAAGCTATGACAGCACCATTGATGATGATTGCAATGGTCATCCAGTTGAATTTCTCAACACACTATGTCCAGGAGGAATGAGCCCACACAAGCTTACACTGAAACTCAACTGTCCTGTCATATTGCTACGAAATCTAAACCCTTCTATTGGCCTGTGTAATGGAACAAGGCTCATTTGCAGAGGCTTCAAGTGCAACATCATTGTTTGTGAGATAGCAACAGGTTATCGAGCTGGGGAATATGTCTTCATACCCCGCATAAATCTCAGGCCTTCGACATCAGTTACATATCCATACAAGTTTGAAAGGCGACAATTTCCAATCAAGTTGTGCTTTGCCATGACAATCAACAAATCCCAAAGGCAAACACTCACAGACGTTGCAATTTACCTACGAAAGCAGTGCTTCTCACACGGCCAACTCTACGTAGCTCTATCCAGAGCCAAGAAAGCCAGCAGCGTGAAAGTCTTCATTCATGACAATGAAACAAATGAAAGACCACCAAACTCTGTTTCTAATGTTGTTTCATTTGACTTGCTAAAGAAGGCCGGCATACTGTCACCACAATTTCAGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_425649.p1 GENE.R_Transcript_425649~~R_Transcript_425649.p1 ORF type:complete len:363 (+),score=37.43,PIF1|PF05970.10|3.1e-61 R_Transcript_425649:759-1847(+)
MARKENVEAVDRLLRDICNSPQPFGGKVFVFGGDFRQVLPVIPKRAQHELVDASLVSSYLWPLFHRFTLVENMRAKEDTEFTAFLLRLGNGEFQNTEHACITLPPSLLFKLPPTENCLDYLVESVYTDINELARNPHAFTARATLTPTNDEVDCINQIVIDKFPGQPYVYKSYDSTIDDDCNGHPVEFLNTLCPGGMSPHKLTLKLNCPVILLRNLNPSIGLCNGTRLICRGFKCNIIVCEIATGYRAGEYVFIPRINLRPSTSVTYPYKFERRQFPIKLCFAMTINKSQRQTLTDVAIYLRKQCFSHGQLYVALSRAKKASSVKVFIHDNETNERPPNSVSNVVSFDLLKKAGILSPQFQD*

Click here to download the sequence:
Link to NCBI Protein BLAST