Transcript Information: R_Transcript_42565.p1


Annotated TAIR IDAT1G49000.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18123559-18124029 | Reverse length=156
E-Value4.8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.70960666034
Replicate 218.092556741704
Replicate 328.511577646275
Condition 2: 8 Hour
Replicate 112.763908323564
Replicate 216.889602241747
Replicate 317.57230389846
Condition 3: 24 Hour
Replicate 128.330911046954
Replicate 223.228410959225
Replicate 334.694340407954


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42565.p1 GENE.R_Transcript_42565~~R_Transcript_42565.p1 ORF type:5prime_partial len:94 (-),score=7.36 R_Transcript_42565:6-287(-)
TACACGCGTAAAGCCTCCCAAAAACTTGCTAGAGCCGCTGTTAAGCCTACCATTAAGCGTCTGATGATGGGGAGTCATTGTAATAGTAACAAAACCGGTGATGAAAGCTGTGGCGGTGATAATAACGTTGTATGGCGAAAGAACATCCTTATGGGGGATAAGTGTGAACCCCTTGATTTTTCTGGTGTCATTTATTATGATTCTGATGGAAAGTTAGTTTCCGAGATTCCTACTAAGTCGCCACGTGCCCGTTGGTCTGCTTATCCAACGGCTGAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42565.p1 GENE.R_Transcript_42565~~R_Transcript_42565.p1 ORF type:5prime_partial len:94 (-),score=7.36 R_Transcript_42565:6-287(-)
YTRKASQKLARAAVKPTIKRLMMGSHCNSNKTGDESCGGDNNVVWRKNILMGDKCEPLDFSGVIYYDSDGKLVSEIPTKSPRARWSAYPTAEI*

Click here to download the sequence:
Link to NCBI Protein BLAST