Transcript Information: R_Transcript_425692.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13226783300521
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.17743380396555
Replicate 20.32407075132153
Replicate 30.13153341029266
Condition 3: 24 Hour
Replicate 10.16636092193988
Replicate 20.15982071659839
Replicate 30.15860655570216


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_425692.p1 GENE.R_Transcript_425692~~R_Transcript_425692.p1 ORF type:5prime_partial len:138 (+),score=10.24,gag_pre-integrs|PF13976.2|2.3e-18 R_Transcript_425692:2-415(+)
TATCATATTCAAAACAAGAAGGTCAAATCCAATGACACTAATCAAACATACCTCTGGCATTGTCGTCTAGGCCACATCAATGAGAAACGCATTCAAAAGCTCCATAAAGATGGACTTCTTGATTCATTTGACTTTGAGTCATTTGAAGTTTGCGAAGCTTGTTTGATGGGCAAGATGACGAAATCACCCTTCACCGTGACGGGTGAAAGAGCTAGTGATCTCTTAGGCCTCATACACATAGATGTATGTGGTCCGATGAGCACAGAAGCCAGAGGCAGGTACAACTACTTCATTACTTTTACTGACGATCTAAGTAGATATGGATATGTCTATTTAATGAGGCAAAATCGGAAGCCCTTAAAAAGTTCAGGGAATTCCAAAATGAAGTTGAGAACCAACTTGGCAAGAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_425692.p1 GENE.R_Transcript_425692~~R_Transcript_425692.p1 ORF type:5prime_partial len:138 (+),score=10.24,gag_pre-integrs|PF13976.2|2.3e-18 R_Transcript_425692:2-415(+)
YHIQNKKVKSNDTNQTYLWHCRLGHINEKRIQKLHKDGLLDSFDFESFEVCEACLMGKMTKSPFTVTGERASDLLGLIHIDVCGPMSTEARGRYNYFITFTDDLSRYGYVYLMRQNRKPLKSSGNSKMKLRTNLARK*

Click here to download the sequence:
Link to NCBI Protein BLAST