Transcript Information: R_Transcript_42599.p2


Annotated TAIR IDAT5G08430.1
Annotated Gene NameSWIB/MDM2 domain;Plus-3;GYF
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2716974-2720095 | Forward length=553
E-Value7E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9198792285574
Replicate 24.9653413146651
Replicate 34.3337071127856
Condition 2: 8 Hour
Replicate 15.3769635863883
Replicate 24.3815241445566
Replicate 34.1699646019808
Condition 3: 24 Hour
Replicate 15.661891647373
Replicate 24.7687046249897
Replicate 33.8451373098603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42599.p2 GENE.R_Transcript_42599~~R_Transcript_42599.p2 ORF type:3prime_partial len:296 (+),score=63.55,GYF|PF02213.12|8.6e-09 R_Transcript_42599:1355-2239(+)
ATGTATATGACTGTCTCCCATGTTTCCCAAGTGCTTGCCCTGTGGTGCATTTTGTCTGCCTTTACTAGCACTACAGTAACAGAGTACTTGGGCAAAAGGAAGCTGCTTCAAACTCCTTCTGAACAATCACGCTTGCTGAGTGAGATCCCAAAAGTGAAAGCAGAAGTGCAGGTTGAGACTATTCCAGATGGTCCGCCAGATGGTGTAAATCAAAGCACTGATGATTCACCTAAAGTTACTGATTGGGACTGGGAACCTTACTATGGTTCAGCAGCTAAAGGAGCTGCAACAGAAGTATCAACTAAGCAGGATGCTAAAGAAAAAATAGAAATCAGAACAAGCAATGGTGATGCTCAGTGCATAAATCCCCAAGAGGTAGCTGCCCTTCCTGAAGCAGAGGCAACAAGAGTAGAAAGCAATGGGCATGTTCATTCCTATCAACCAGAAGATAAACATTTTCCTAAGATGGAAACAGTTGGAGTGGTAAGCAACAGTCATACTGTAACCAAGATTTTAAGGTCAGATCCTACACGGATCTACAGGACAGAAGAAACAGGGGTATTTAAAAATGGGCATGTTGAGGTGCCAACTTCGAAAGCAACAGATGGCATGGAAAGTATAGAAAGGAAACAAGTGCAGGTGATTGATTTGAGTGACGAGGATGAGGAACCCAAGGTTTTTTGTATCAAGAAACCGATTCGTAATCCCCTTGAAGAATTGATGTGGTATTACATTGACCCTCAGGAGAATTACCAGGGGGCATTCTCGTTGGCATCTCTAAAGCGATGGAGGGATGCAGACTATTTCCCACCCCATTTCAGAGTCTGGAAGGCCGGTCAGAGTCCAAAGGAAGCAGTTTTGTTGAGCGATATTCTTCGACAAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42599.p2 GENE.R_Transcript_42599~~R_Transcript_42599.p2 ORF type:3prime_partial len:296 (+),score=63.55,GYF|PF02213.12|8.6e-09 R_Transcript_42599:1355-2239(+)
MYMTVSHVSQVLALWCILSAFTSTTVTEYLGKRKLLQTPSEQSRLLSEIPKVKAEVQVETIPDGPPDGVNQSTDDSPKVTDWDWEPYYGSAAKGAATEVSTKQDAKEKIEIRTSNGDAQCINPQEVAALPEAEATRVESNGHVHSYQPEDKHFPKMETVGVVSNSHTVTKILRSDPTRIYRTEETGVFKNGHVEVPTSKATDGMESIERKQVQVIDLSDEDEEPKVFCIKKPIRNPLEELMWYYIDPQENYQGAFSLASLKRWRDADYFPPHFRVWKAGQSPKEAVLLSDILRQT

Click here to download the sequence:
Link to NCBI Protein BLAST