Transcript Information: R_Transcript_4260.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value3E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.91876231955
Replicate 211.408948628034
Replicate 315.480352348085
Condition 2: 8 Hour
Replicate 111.963413467375
Replicate 214.600941110911
Replicate 317.15700181927
Condition 3: 24 Hour
Replicate 121.070864167893
Replicate 218.329027936462
Replicate 317.889950406185


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4260.p1 GENE.R_Transcript_4260~~R_Transcript_4260.p1 ORF type:complete len:219 (+),score=76.74,Rrp15p|PF07890.8|3.5e+02,Rrp15p|PF07890.8|5e-09 R_Transcript_4260:211-867(+)
ATGGTGGAGGGAACATATGACGGGCCACGATCAGCTACAATGCTGAAGAAGAGGAAGAAAGGGGTTAAGAAATTCCGAGGAGGAGCTAAGAAAATGAAGGTTGTTCCTGGAACTGCTAAGAAGAATAAAGTTAACCCAAAAATGCAAAAATTGTTTCGTCGAAGGGCGAGGGAATATAATTCAGATGATGAGGATGAGGAGGAGACTATGCAAGAAGGTTCTGATGGAGAAATGGAGATGGAAGGGAATGATGGAATTAGAAGTGATGATGACGATATAGGGGAAGGAGGAAGTTCGGATGAAGAAGGTGGTGAAGTTAAAGCTCAACCTGGGGTTATGAAGTTTGTGGAAGGATGTAAAGCGTTTAGGGTGGCATTTCAATCGATCATGAAAACTCGTACTGATGATGAGACATTGGGTCCGGTATTGTCAGCAAAGAAGAAGCTTGTTGTGTCAAAGCTTGCTGAAGAAGAGGCTGAGAAAAAGGCTAAGGGGGAAGCAAAGAAGGAAAAGCACTTGATTGAGGAGAAGGGGCATGTAAAGCCTGAGAATTTCTTAAATGCACATGAGAAGTTTCTGATAGGCATCACTACAAAAGGAGTTATGTGTGCCTTTTGCTCTTGTGCGGTTCAACTTTGCAGCGGTCAAGCTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4260.p1 GENE.R_Transcript_4260~~R_Transcript_4260.p1 ORF type:complete len:219 (+),score=76.74,Rrp15p|PF07890.8|3.5e+02,Rrp15p|PF07890.8|5e-09 R_Transcript_4260:211-867(+)
MVEGTYDGPRSATMLKKRKKGVKKFRGGAKKMKVVPGTAKKNKVNPKMQKLFRRRAREYNSDDEDEEETMQEGSDGEMEMEGNDGIRSDDDDIGEGGSSDEEGGEVKAQPGVMKFVEGCKAFRVAFQSIMKTRTDDETLGPVLSAKKKLVVSKLAEEEAEKKAKGEAKKEKHLIEEKGHVKPENFLNAHEKFLIGITTKGVMCAFCSCAVQLCSGQAV*

Click here to download the sequence:
Link to NCBI Protein BLAST