Transcript Information: R_Transcript_426084.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeHomolog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.83318652445627
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_426084.p1 GENE.R_Transcript_426084~~R_Transcript_426084.p1 ORF type:internal len:126 (+),score=35.78,EF-hand_1|PF00036.28|1.5e+02,EF-hand_1|PF00036.28|0.00017,EF-hand_1|PF00036.28|0.00042,EF-hand_1|PF00036.28|0.0004,EF-hand_7|PF13499.2|0.0012,EF-hand_7|PF13499.2|0.036,EF-hand_7|PF13499.2|8.4e-09,EF-hand_8|PF13833.2|1.3e-05,EF-hand_8|PF13833.2|22,EF-hand_8|PF13833.2|0.0064,EF-hand_6|PF13405.2|7.6e+02,EF-hand_6|PF13405.2|0.02,EF-hand_6|PF13405.2|0.0095,EF-hand_6|PF13405.2|0.025,EF-hand_5|PF13202.2|5.5e+02,EF-hand_5|PF13202.2|4.8,EF-hand_5|PF13202.2|2.2e+02,EF-hand_5|PF13202.2|0.00069 R_Transcript_426084:2-376(+)
TTTGAGGGAATGAAAACACTTGGTGCTGAAATTAGTAAAGAAGAAGTTTTGGAACTTATGCATGTTTTGGACGAAGATAAAGATAATTGCATCGAATACAAAGAATTCAAATCATTAATGAATGGGAATCTCAAAGAAAAAACACAAAAATTGAGGAAAATCAATGAAAGTTTGGAAAAAGAACTGACAGAAATATTTAACCAGATTGACAAAGAAGGAAACAAGAAAATCAATCATCAACAATTCATTCTTGCTGTGAAAGAAATTAATCTATTTGGGAAAGATCTTGACGAAGAGCACATACTCAACTGGCTGAAGAGGAATGATTTGGATGGAGATGGAGAACTATCACTTGATGAATTCATCAGAATGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_426084.p1 GENE.R_Transcript_426084~~R_Transcript_426084.p1 ORF type:internal len:126 (+),score=35.78,EF-hand_1|PF00036.28|1.5e+02,EF-hand_1|PF00036.28|0.00017,EF-hand_1|PF00036.28|0.00042,EF-hand_1|PF00036.28|0.0004,EF-hand_7|PF13499.2|0.0012,EF-hand_7|PF13499.2|0.036,EF-hand_7|PF13499.2|8.4e-09,EF-hand_8|PF13833.2|1.3e-05,EF-hand_8|PF13833.2|22,EF-hand_8|PF13833.2|0.0064,EF-hand_6|PF13405.2|7.6e+02,EF-hand_6|PF13405.2|0.02,EF-hand_6|PF13405.2|0.0095,EF-hand_6|PF13405.2|0.025,EF-hand_5|PF13202.2|5.5e+02,EF-hand_5|PF13202.2|4.8,EF-hand_5|PF13202.2|2.2e+02,EF-hand_5|PF13202.2|0.00069 R_Transcript_426084:2-376(+)
FEGMKTLGAEISKEEVLELMHVLDEDKDNCIEYKEFKSLMNGNLKEKTQKLRKINESLEKELTEIFNQIDKEGNKKINHQQFILAVKEINLFGKDLDEEHILNWLKRNDLDGDGELSLDEFIRMM

Click here to download the sequence:
Link to NCBI Protein BLAST