Transcript Information: R_Transcript_42617.p2


Annotated TAIR IDAT5G63490.1
Annotated Gene NameCBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25418716-25421970 | Reverse length=543
E-Value8.9E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2425801137995
Replicate 23.1778184413857
Replicate 33.4669656902285
Condition 2: 8 Hour
Replicate 14.3677488824816
Replicate 25.076524526107
Replicate 34.5133734515557
Condition 3: 24 Hour
Replicate 13.3505988926919
Replicate 25.6032279343629
Replicate 35.3240362751912


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42617.p2 GENE.R_Transcript_42617~~R_Transcript_42617.p2 ORF type:3prime_partial len:185 (+),score=45.49,CBS|PF00571.24|0.11,CBS|PF00571.24|9.5e-07,CBS|PF00571.24|0.044 R_Transcript_42617:1028-1579(+)
ATGGCTGCTCGCAGAGTAGACGCCTTGTTGTTGACAGATTCAAATGCTTTACTATGTGGGATTCTTACAGATAAGGATATTGCTATAAGAGTAGTAGCTCGAGAGTTGAATCTTGAGGAGACACCTGCTTCGAAAGTGATGACCAGAAATCCTGTATTTGTTCTTTCTGACACTCTTGCTGTGGAAGCCTTGCAAAAGATGGTCCAGGGAAAGTTCAGACATTTACCAGTGGTGCAAAATGGAGAGGTTGTTGCATTACTTGATATTGCAAAATGCTTGTATGATGCCATTGCTCGTATGGAGAGGGCCGCCGAAAAAGGGAAAGCAATTGTGGCAGCTGTTGAAGGTGTCGAGAAAAATTGGGGTTCTTCAGTATCGGGGCCTAATACATACATTGAGGCACTGAGAGAGCGTATATTCAGGCCTTCATTGTCTACAGTTCTTTCTGAGCATTCAAAGCTCATAACCGTGTCACCAACTGACACAGTTTTAGCAGCAGCAAAGAAGATGCTTGAATTTCGATTAAGCTGTGCTATTGTGGCTGTAGACAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42617.p2 GENE.R_Transcript_42617~~R_Transcript_42617.p2 ORF type:3prime_partial len:185 (+),score=45.49,CBS|PF00571.24|0.11,CBS|PF00571.24|9.5e-07,CBS|PF00571.24|0.044 R_Transcript_42617:1028-1579(+)
MAARRVDALLLTDSNALLCGILTDKDIAIRVVARELNLEETPASKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVQNGEVVALLDIAKCLYDAIARMERAAEKGKAIVAAVEGVEKNWGSSVSGPNTYIEALRERIFRPSLSTVLSEHSKLITVSPTDTVLAAAKKMLEFRLSCAIVAVDN

Click here to download the sequence:
Link to NCBI Protein BLAST