Transcript Information: R_Transcript_426209.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.32705604721418
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.39437305742157


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_426209.p1 GENE.R_Transcript_426209~~R_Transcript_426209.p1 ORF type:internal len:111 (+),score=14.60,PPR|PF01535.16|7.2,PPR|PF01535.16|0.0026,PPR|PF01535.16|3.1e-08,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|0.0045,PPR_2|PF13041.2|2.1e-07,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.0072,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|0.00028 R_Transcript_426209:2-331(+)
CAAGCTCAAAGTTTGACCTTGTACTTTGATAGTTTTACATACTCTTTTCTCATCAAAGCCTGTGCTAAACTGAACCATCGATTTGCGGGTTTTCAGTTCCATGCCCATGTAGTGAATTTGGGATTTGAATGGCATGTCTATGTACAGACCGCATTGCTCAACATGTATGTTGATTTTGGGTTGTTGAGTAAAGCACAGAAGGTGTTTGATCAAATGCCTGACAGAAATACGGTTACTTGGAATGTCATGGTTACTGGGTTAGTTAAATGGGGTTACCTCGAGGATGCTCTTGCTTTGTTTTGGGAGATGCCCAGTAGGAATATAGTTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_426209.p1 GENE.R_Transcript_426209~~R_Transcript_426209.p1 ORF type:internal len:111 (+),score=14.60,PPR|PF01535.16|7.2,PPR|PF01535.16|0.0026,PPR|PF01535.16|3.1e-08,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|0.0045,PPR_2|PF13041.2|2.1e-07,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.0072,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|0.00028 R_Transcript_426209:2-331(+)
QAQSLTLYFDSFTYSFLIKACAKLNHRFAGFQFHAHVVNLGFEWHVYVQTALLNMYVDFGLLSKAQKVFDQMPDRNTVTWNVMVTGLVKWGYLEDALALFWEMPSRNIVS

Click here to download the sequence:
Link to NCBI Protein BLAST