Transcript Information: R_Transcript_42639.p1


Annotated TAIR IDAT1G02860.1
Annotated Gene NameSPX (SYG1/Pho81/XPR1) domain-containing protein
Annotated Gene Symbol(s)NLA, BAH1
Annotation TypeOrtholog
Chromosome Positionchr1:635474-637083 | Forward length=335
E-Value1.7E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0702669318663
Replicate 23.1753664209833
Replicate 34.1005888289409
Condition 2: 8 Hour
Replicate 16.726055494768
Replicate 29.1790039656719
Replicate 312.549261663477
Condition 3: 24 Hour
Replicate 19.8491827304039
Replicate 25.1053840024485
Replicate 38.3767758678249


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42639.p1 GENE.R_Transcript_42639~~R_Transcript_42639.p1 ORF type:complete len:324 (+),score=51.58,zf-C3HC4_3|PF13920.2|1.8e+02,zf-C3HC4_3|PF13920.2|3.6e-07,zf-C3HC4|PF00097.21|5.4e+03,zf-C3HC4|PF00097.21|4.6e-07,SPX|PF03105.15|29,SPX|PF03105.15|1.9e-05,zf-RING_2|PF13639.2|97,zf-RING_2|PF13639.2|3.7e-06 R_Transcript_42639:371-1342(+)
ATGAAGTTTTGCAAGACATATGAGGAGTACATGCAAAGAATGCAGAGAGAATTACCTGGGGTTGGATTCAAAAATTTGAAGAAAATTCTGAAAAAGTGTAGACAAGATCTTGAGTCTCATAATTCCTCCAACAATGGTTCCCTTACTGCTGCAAGTTGCCCACATCAATGCCCTGTATGTGATGGAACATTTTTCCCATCTCTTCTCAAGGAAATGTCCGATGTAGTAGGTTGTTTCAACCAACGTGCTCAGAAGTTGCTTGACTTACATTTAGCAACAGGCTTTAAAAAGTATTATGTATGGTGTAAAGGCAAGCAGGATCATATTTCTTTGATTCAGGAGGGGCAAGACCTCGTAACATATGCCATGATTAATGCCATTGCAGTTCGGAAAATTCTGAAGAAGTATGATAAGATTCATTACTCTAAGCAAGGTCAAGCCTTCAAATCACGCGCTCAGAGTATGCACGTCGAGATCCTGCAATCTCCATGGCTTTGCGAGCTCATGGCTTTCCACATCAACTTGAGGGAAAAGAAGGGAAAGACAAGAAAGCCGGCTAATTTGTTCGAGGGTTGTGCTCTCAAATTCAGTGATGGAAAGCCGTCACTAACTTGTGAGCTTTTTGATTCTGTGAAGGTTGATCTTGACCTGACTTGCTCTATTTGTTTGGATACAGTATTTGACCCTGTTGCTCTTACTTGCGGCCATATCTTCTGCTATATGTGTGCCTGCTCCGCTGCATCAGTGACTATTGTTGATGGACTACAGGCAGCGTCTCCGAAAGAGAAATGCCCTCTGTGCCGTGAGGCTCGTGTTTATGAAGGTGCTGTCCACTTGGATGAGCTTAATATTCTATTGAGCCGAAGCTGTCATGAATACTGGAAGGAGAGACTCCAATCGGAGCGAACAGAAAGGATTAAGCAAACAAAGCAACATTGGGAATCTCAATGCCGAGCTATCATGGGCGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42639.p1 GENE.R_Transcript_42639~~R_Transcript_42639.p1 ORF type:complete len:324 (+),score=51.58,zf-C3HC4_3|PF13920.2|1.8e+02,zf-C3HC4_3|PF13920.2|3.6e-07,zf-C3HC4|PF00097.21|5.4e+03,zf-C3HC4|PF00097.21|4.6e-07,SPX|PF03105.15|29,SPX|PF03105.15|1.9e-05,zf-RING_2|PF13639.2|97,zf-RING_2|PF13639.2|3.7e-06 R_Transcript_42639:371-1342(+)
MKFCKTYEEYMQRMQRELPGVGFKNLKKILKKCRQDLESHNSSNNGSLTAASCPHQCPVCDGTFFPSLLKEMSDVVGCFNQRAQKLLDLHLATGFKKYYVWCKGKQDHISLIQEGQDLVTYAMINAIAVRKILKKYDKIHYSKQGQAFKSRAQSMHVEILQSPWLCELMAFHINLREKKGKTRKPANLFEGCALKFSDGKPSLTCELFDSVKVDLDLTCSICLDTVFDPVALTCGHIFCYMCACSAASVTIVDGLQAASPKEKCPLCREARVYEGAVHLDELNILLSRSCHEYWKERLQSERTERIKQTKQHWESQCRAIMGA*

Click here to download the sequence:
Link to NCBI Protein BLAST