Transcript Information: R_Transcript_426638.p1


Annotated TAIR IDAT5G44260.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17829974-17831119 | Reverse length=381
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34011728487054
Replicate 20.52164721531175
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.27777492970417
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.27397837131152
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_426638.p1 GENE.R_Transcript_426638~~R_Transcript_426638.p1 ORF type:3prime_partial len:161 (+),score=20.90,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|5.9e-08,zf-CCCH|PF00642.20|2.5e-05,zf-CCCH_3|PF15663.1|0.019,zf-CCCH_3|PF15663.1|3.5e-05,Torus|PF16131.1|0.43,Torus|PF16131.1|0.13,Torus|PF16131.1|0.018,zf-CCCH_2|PF14608.2|0.65,zf-CCCH_2|PF14608.2|0.35,zf-CCCH_2|PF14608.2|0.027 R_Transcript_426638:38-517(+)
ATGGAAAGCTCTCCACTACACAGCAGAAATTCTGACACTAACCGTTCTCATCATTCAGACTTCAGCGGTTCTAGAGGAGATGATGATGTGGACTTACTTCGAGCAAAGTACAAGCAAAGTAACAAAAAAGTTTACCACGATTTCTTCAAAACCAAAGCTTGCAGTCTCTATAATCTCAACATCTGCAAGAAAGGAAATGACTGTCCCTTTGCTCACTCTTCGGACGAGCTAAGAGATAAGCCCAACTTATTCAAGACTCAACTTTGCCAGACTTTTCTCGAACAAGGGCACTGTGAAAAAGGAGAAAATTGTACTTTTGCTCACGGAGAAGACGAGCTCAGGTCAACTCCTGATCTCTTCAAAACAGCAATATGTCACCTCTGGTCCCAAGGACAGTGTACCAGCGGAGATGGTTGTAGGTTTGCCCATGGATATGATGATCTGAGACCTGCGCCATCACATCAGAAATTCAAGAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_426638.p1 GENE.R_Transcript_426638~~R_Transcript_426638.p1 ORF type:3prime_partial len:161 (+),score=20.90,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|5.9e-08,zf-CCCH|PF00642.20|2.5e-05,zf-CCCH_3|PF15663.1|0.019,zf-CCCH_3|PF15663.1|3.5e-05,Torus|PF16131.1|0.43,Torus|PF16131.1|0.13,Torus|PF16131.1|0.018,zf-CCCH_2|PF14608.2|0.65,zf-CCCH_2|PF14608.2|0.35,zf-CCCH_2|PF14608.2|0.027 R_Transcript_426638:38-517(+)
MESSPLHSRNSDTNRSHHSDFSGSRGDDDVDLLRAKYKQSNKKVYHDFFKTKACSLYNLNICKKGNDCPFAHSSDELRDKPNLFKTQLCQTFLEQGHCEKGENCTFAHGEDELRSTPDLFKTAICHLWSQGQCTSGDGCRFAHGYDDLRPAPSHQKFKKK

Click here to download the sequence:
Link to NCBI Protein BLAST