Transcript Information: R_Transcript_42679.p1


Annotated TAIR IDAT5G57070.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23096221-23097948 | Forward length=575
E-Value8.4E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7742991970875
Replicate 23.3486922514032
Replicate 34.237929124647
Condition 2: 8 Hour
Replicate 15.4282858495488
Replicate 24.8502072255203
Replicate 35.3846883180095
Condition 3: 24 Hour
Replicate 16.9935266036547
Replicate 24.5376848435159
Replicate 35.4806533267032


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42679.p1 GENE.R_Transcript_42679~~R_Transcript_42679.p1 ORF type:complete len:627 (+),score=95.58,DUF761|PF05553.7|3.9e+03,DUF761|PF05553.7|4.7e-06 R_Transcript_42679:84-1964(+)
ATGACCGTACTTCCCCAACCATTATTAATCTCTCTCAACCCAAACACACTTTTTCCTCAAATCCCCTCATCCATTTCAATTCAAACACCCCCAAACCAAACAAACCCCAACAAAATGGAGGATGGCGAATCACCACCGTTTTGGCAGCCACCACCCACCGTGAGACGGCGGCTCTCATCATCATTCTTAAACTCTTCATCGGTCATGATTGTATTGCCCTCACTTTGTATTCTCTTTTTTGTTTTCATTGTTGTCCCTTCTATCCCCAAGTTTCTACCCCAATTCCCAAACAGTCCCCAAGCTCAAACCCCAGTATTTCAAACGTCCACCACCACCACCAGTCATAAACCGATTCCAGTGAAGAAAGGGTGGGATACCCTCAATGTGGTGCTCGTCGTTTTTGCTATTTTGTGCGGCGTTTTCGCCCGTCGAAACGACGACGTTTCGACGAATGATGTCCGTTATCAACATCAACAACAGCAACAACTACAGAGGAGTAAATCACAGGGAATGCATCATCATCATCATCGGTGTAGCGCGTGTTCACAGCAATGGTATGGGTATCAGGAGCAGAGGATCTACGCACCTTCGCCGCCACCGGTGACCGGGGTCTCCCGGTTGAGGAGGACTGTCAGTGAAATGCCGCCAGCTCAGGGGAATGTCTGGGATACCGGGAATGACCGGTTGAGATTCTACGACGATTTTGACGTCAGTAAGTACTATTCCTCCACCAATATGAGCTTCAACCACCAACAGCAGTATGAGAACCTCAACCACCAAAACTATGTTCATAATGTGGAGGTCGAACCGGAACCGGAACCGGAGTCGCAGCCAGAAGTGAACCGGCCCGAACCGGAGATAAATAACGGTGATGATCCGGTTCAGGATATTCCGGTGGACAATTTTGTCCTCGAGGCAACAGAGGAATTGCCATCTGAATGTCCTCCCTCTCCTCCTCCCACTCCTCCACCACGAACGGCGGCGCAGCCACCACCACCTCCGCCGCCGCCTCCTTCCAGTTTTAGTAACAAGAAACCTAAACGAACTTTCCAATCCATTCCTCGCAAAAATCACGCGGCACCTCCACCGCCTCCTCCTCCACCACCTCCGCCTCAAACTCCGCCGCGTACTGCGGCGAGCAATGGATGGGGAGAGAAGAAGAAGAGAAGTTCTCGGAAGAGAATGAACGCCACAACAAAGGAGATCGCAAACGCCATAGCTTCGCTTTACAGCAAAAAGCGAAAACGAAAGCAAAAATCAATCCGAAACTCCGAAGATTCATTCGCAACTGAATCTCAAGCACCTCCGCAAGAAGCGCCGCCACCACCTCCACCACCGCCTCCTCCTCCACCTCCATCGGTTTTCCACAACCTGTTCAGAAAGCACAGCAGCAGCAGCAGCAAGTCAAAGAAAATCCACTCCCTCTCCTCAATACCTAAACCACCACCACGACATCATCCAAAACCGCTCAATTCCACCGCTAAACCGCCATTACCGGCAAGAAAACCACTGATGAGAGATTTTTACAAGAGAGATGCGATTTTACCGAACAGCGGGAACCCATCGCCGTTGATCCCACCACCATCACCACCGCCGCCGCCATTCAAAATTCGAGAAGTGAAGTTCGAAGATGATGAGCTGGAAGAGAAGGATAGGCGATCGAACGGTGGAGAAGAGGAGAGAGAAGAGAACAATGGGCCACCACCAGAACCAGCACGGATGTCGACGTCATCAACATCTTCGGTGACGTGTCCAAGCCCAGACGTGAACGTAAAGGCTGACACATTCATTGCAAGGCTTCATGATGGGTGGAGGCTTGAGAAGCTTAATTCCTGGAGAGAGCGGGCCAAGCTCAATAGTGGGCCCGAGCCTGTTGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42679.p1 GENE.R_Transcript_42679~~R_Transcript_42679.p1 ORF type:complete len:627 (+),score=95.58,DUF761|PF05553.7|3.9e+03,DUF761|PF05553.7|4.7e-06 R_Transcript_42679:84-1964(+)
MTVLPQPLLISLNPNTLFPQIPSSISIQTPPNQTNPNKMEDGESPPFWQPPPTVRRRLSSSFLNSSSVMIVLPSLCILFFVFIVVPSIPKFLPQFPNSPQAQTPVFQTSTTTTSHKPIPVKKGWDTLNVVLVVFAILCGVFARRNDDVSTNDVRYQHQQQQQLQRSKSQGMHHHHHRCSACSQQWYGYQEQRIYAPSPPPVTGVSRLRRTVSEMPPAQGNVWDTGNDRLRFYDDFDVSKYYSSTNMSFNHQQQYENLNHQNYVHNVEVEPEPEPESQPEVNRPEPEINNGDDPVQDIPVDNFVLEATEELPSECPPSPPPTPPPRTAAQPPPPPPPPPSSFSNKKPKRTFQSIPRKNHAAPPPPPPPPPPPQTPPRTAASNGWGEKKKRSSRKRMNATTKEIANAIASLYSKKRKRKQKSIRNSEDSFATESQAPPQEAPPPPPPPPPPPPPSVFHNLFRKHSSSSSKSKKIHSLSSIPKPPPRHHPKPLNSTAKPPLPARKPLMRDFYKRDAILPNSGNPSPLIPPPSPPPPPFKIREVKFEDDELEEKDRRSNGGEEEREENNGPPPEPARMSTSSTSSVTCPSPDVNVKADTFIARLHDGWRLEKLNSWRERAKLNSGPEPVV*

Click here to download the sequence:
Link to NCBI Protein BLAST