Transcript Information: R_Transcript_42681.p1


Annotated TAIR IDAT3G13540.1
Annotated Gene Namemyb domain protein 5
Annotated Gene Symbol(s)ATMYB5, MYB5
Annotation TypeOrtholog
Chromosome Positionchr3:4420239-4421443 | Forward length=249
E-Value8.1E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1062998801923
Replicate 28.8171775162098
Replicate 38.581376017894
Condition 2: 8 Hour
Replicate 111.466190534209
Replicate 212.159996167412
Replicate 38.1709667143132
Condition 3: 24 Hour
Replicate 17.8375595671618
Replicate 27.929232048274
Replicate 37.7367415358519


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42681.p1 GENE.R_Transcript_42681~~R_Transcript_42681.p1 ORF type:complete len:331 (+),score=71.22,Myb_DNA-binding|PF00249.27|1.2e-14,Myb_DNA-binding|PF00249.27|4.5e-14,Myb_DNA-binding|PF00249.27|5.7e+03,Myb_DNA-bind_6|PF13921.2|1.3e-09,Myb_DNA-bind_6|PF13921.2|8.2e-07,Myb_DNA-bind_6|PF13921.2|4.5e+03 R_Transcript_42681:181-1173(+)
ATGGGAAGAGCTCCTTGTTGCTCTAAGGTTGGCTTGCATAGAGGTCCATGGACCGCTAGAGAAGATGCTTTGCTTATCAAATACATTGAAGCTCATGGTGAAGGTCAATGGAGGTCTTTGCCCAAAAAAGCAGGACTTCTAAGATGTGGAAAGAGTTGTAGATTGAGATGGATGAACTATCTAAGGCCAGATATCAAAAGAGGCAACATTACTCCAGATGAAGATGACCTTATTATAAGGATGCATGGTTTATTAGGCAACCGATGGTCCCTCATTGCTGGAAGATTACCTGGTCGAACTGATAACGAGATCAAGAACTATTGGAACACCCATCTCAGCAAGAAGCTCCGCAGCCAAGGAACCGACCCGAATACCCACAAGAAGCTACCCGAATTCGACCCAGATCATCATAAACTTGTCACCAAGAAGATCAAGTATTCTAAGTGCTCCACAAACAAAAGTGTTAGCAGCCAATCACATGAGAATAAGAAACAAGTTGTGACGATGAAGGATGATATTATTATGAAGGAAGACGTGAAGAAAACCAAGATCCATTTGCCCAAACCCGTTAGGGTTATAAATGTCATACCATTGACAAGAAACAACAGCAATGGAAGCATTGAAACGAGTGTGAGCACTACTAGCGCCTCATCAAGCCAAAGTCAATACCAAAATCATGGTTTGACATTTGACTCAGAGAATTCCAATAATAATATCCTCGACATGCCAATGCCATGGTTATCATCATCAGATCATGATGCTAACAATATGGTTGATGAGAATGGGTTTGACCATCTGATGATGATGGCATCATGTGGTGATCATCATGATGTTGACCAAGTCACTGCACCAGAAGATCAAAACCAGCAGCTCGAGCAGCTCTTTGAGGAGTATCTACAGGTCATCAAGGCAGATCATCATCATGGCCATAATGATCATGATGATGGCAATGGAGATCATCTAGATTCCTTCGCTGAATCTTTTCTCATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42681.p1 GENE.R_Transcript_42681~~R_Transcript_42681.p1 ORF type:complete len:331 (+),score=71.22,Myb_DNA-binding|PF00249.27|1.2e-14,Myb_DNA-binding|PF00249.27|4.5e-14,Myb_DNA-binding|PF00249.27|5.7e+03,Myb_DNA-bind_6|PF13921.2|1.3e-09,Myb_DNA-bind_6|PF13921.2|8.2e-07,Myb_DNA-bind_6|PF13921.2|4.5e+03 R_Transcript_42681:181-1173(+)
MGRAPCCSKVGLHRGPWTAREDALLIKYIEAHGEGQWRSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPDEDDLIIRMHGLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLRSQGTDPNTHKKLPEFDPDHHKLVTKKIKYSKCSTNKSVSSQSHENKKQVVTMKDDIIMKEDVKKTKIHLPKPVRVINVIPLTRNNSNGSIETSVSTTSASSSQSQYQNHGLTFDSENSNNNILDMPMPWLSSSDHDANNMVDENGFDHLMMMASCGDHHDVDQVTAPEDQNQQLEQLFEEYLQVIKADHHHGHNDHDDGNGDHLDSFAESFLI*

Click here to download the sequence:
Link to NCBI Protein BLAST