Transcript Information: R_Transcript_42687.p1


Annotated TAIR IDAT5G60690.1
Annotated Gene NameHomeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Annotated Gene Symbol(s)REV, IFL, IFL1
Annotation TypeOrtholog
Chromosome Positionchr5:24397734-24401933 | Forward length=842
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.778999518579
Replicate 218.245907847146
Replicate 326.871880478293
Condition 2: 8 Hour
Replicate 123.769903983876
Replicate 224.871577346161
Replicate 334.243915708403
Condition 3: 24 Hour
Replicate 142.612912363002
Replicate 224.351069465152
Replicate 341.881034933057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42687.p1 GENE.R_Transcript_42687~~R_Transcript_42687.p1 ORF type:complete len:855 (+),score=141.96,MEKHLA|PF08670.7|5.4e-49,START|PF01852.15|6.3e-48,Homeobox|PF00046.25|7.6e-16 R_Transcript_42687:708-3272(+)
ATGGCGATGGTGATGGCGCAACAGCAGCAGCAGTATAGAGAGTGCAGTAGCGGAAGTGGAAGCAGCGGTGGAGGAGGAGGTGGTGGATTAGGTGGAGGAATGAGCAGCAAACACGTGGCAGCTGCAGATACCGGAAAGTACGTCCGGTACACAGCAGAACAAGTAGAAGCTTTAGAAAGAGTGTACGCAGAGTGCCCTAAGCCGAGCTCCTTACGCCGTCAACAGTTGATTCGTGAGTGCCCTATCCTCTCCAACATCGAGCCCAAACAGATCAAAGTCTGGTTCCAAAATCGCAGGTGTAGGGAGAAGCAGAGGAAAGAATCGTCGAGATTACAGACGGTGAATCGGAAATTGTCTGCGATGAATAAGTTGTTGATGGAAGAGAATGATCGGTTACAAAAGCAGGTTTCGCAGCTCGTTTGTGAAAATGGCTTTATGCGCCAACAACTTCACACTGCAGCTCCGACCACCGATGGAAGCTGTGAGTCTGTGGTCACCACTTCTCAGCAACCTCTTAGAGACGCCAACAACCCTGCTGGACTCCTATCTATTGCGGAGGAGACCTTGGCAGAGTTCCTCTCGAAGGCGACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCGCATAGATGCAATGGAGTGGCAGCCCGTGCCTGTGGTCTAGTTAGTCTAGAGCCTACAAAGATTGCGGAGATCCTAAAAGATCGTCCATCTTGGTTTCGGGACTGCCGGAACCTTGAAGTTTTTACTATGTTTCCTGCTGGAAATGGAGGAACTATTGAACTTGTTTATACACAAATATATGCTCCAACTACTTTGGCCCCCGCACGGGATTTTTGGACTTTGCGATATTCTACAACTTTGGAAAATGGCAGTGTTGTGATCTGTGAGAGGTCTCTGTCTGGGTCTGGACCAAACACTGCTGCACCCCAATTTATAAGAGCTGAAATGCTTCCAAGTGGTTATCTCATTAGGCCATGTGAAGGCGGAGGTTCAATTATCCATATAGTAGACCACCTTAATCTTGAGGCTTGGAGTGTGCCAGAGGTGCTGCGGCCATTATATCAATCCTCAAAAGTTGTGGCTCAAAAAATGACTATAGCAGCATTGCGCTACATCCGACAAATTGCACAGGAGACTAGTGGAGAGGTGGTATATGGCTTGGGTAGACAACCAGCTGTTCTAAGGACGTTTAGTCAAAGATTGAGCAGAGGTTTCAATGATGCAATTAATGGGTTCAGTGTTGATGGATGGACATTGCTCAATTGCGATGGTGCTGAAGATGTCATACTTGCCTGCAATTCTGCCAAGACTTTTATGGCCACTTTGAATGCTGCGAATTCTCTTCCCGTGGTTGGTGGAGTTCTGTGTGCAAAGGCATCTATGCTACTGCAGAATGTACCTCCAGCTGTGCTGGTTCGATTCTTGAGGGAGCATCGTTCAGAGTGGGCAGATTTTAGTGTTGATGCCTATTCTGCAGCAGCTTTGAAGGCTGGCTCATATGCATTTCCAGGGATGAGGGCCACAAGGTTTACTGGAAGTCAAATTATCATGCCTCTTGGTCATACAATTGAGAATGAAGAAATGCTGGAGGTGATACGGCTGGAAGGTCATTCGCTGACTCCTGAAGATGGTTACATATCAAGAGACATACATCTTTTACAGATATGCAGTGGAATTGATGAGAATGCAGTTGGAGCATGCGCTGAACTTGTTTTTGCTCCAATAGATGAAATGTTTCCTGATGATGCTCCCTTGCTGCCTTCTGGTTTCCGTATTATTCCCTTGGACTCGAAGCCTGACACCGCAACAAATCGGACCCTTGATCTTACTTCAAGTCTCGAAGTTGGTACATCGACAAATCAAGGGGCTGGTGACACATCTTCTGGTAGCACTCGGTCAGTGTTGACCATTGCCTTTCAGTTCCCATTCGAGAATAGCCTGCAGGAAAATGTTGCAACAATGGCTCGTCAGTATGTACGTAGTGTGATATCCTCTGTGCAAAGAGTAGCTATGGCAATATCCCCGTCAGGATTAAGTCCGACAGTCGGACCAAAACTATCTGCAGGTTCTCCAGAGGCACTTACCTTGGCTCACTGGATCTGTCAAAGCTATAGTTACCATATGGGGACGGAACTACTTCGAACTTCTACAGCTGGCGATGAGACGGTGTTGAAGCATCTCTGGCATCATCAGGATGCCATTTTGTGCTGCTCGTTTAAGTCTCTTCCAGTTCTTATATTTGCCAACCAAGCGGGACTTGACATGTTGGAGACCACTCTGGTGGCTCTACAAGACGTGACTTTGGACAAGATATTTGATGAATCAGGACGGAAGACATTGTGTGCCGACTTCTCAAAGATACTCCAGCAGGGATTCGCTTGCTTACCCGCCGGAATGTGCATGTCAACCATGGGGCGTCACGTTTCATACGACCAGGCGGTTGCATGGAAGGTCTTTGCCGCAGACGAAACTACAGTCCACTGTCTAGCCTTCACATTTGTGAACTGGTCTTTTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42687.p1 GENE.R_Transcript_42687~~R_Transcript_42687.p1 ORF type:complete len:855 (+),score=141.96,MEKHLA|PF08670.7|5.4e-49,START|PF01852.15|6.3e-48,Homeobox|PF00046.25|7.6e-16 R_Transcript_42687:708-3272(+)
MAMVMAQQQQQYRECSSGSGSSGGGGGGGLGGGMSSKHVAAADTGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTAAPTTDGSCESVVTTSQQPLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISHRCNGVAARACGLVSLEPTKIAEILKDRPSWFRDCRNLEVFTMFPAGNGGTIELVYTQIYAPTTLAPARDFWTLRYSTTLENGSVVICERSLSGSGPNTAAPQFIRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYQSSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFSVDGWTLLNCDGAEDVILACNSAKTFMATLNAANSLPVVGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDAYSAAALKAGSYAFPGMRATRFTGSQIIMPLGHTIENEEMLEVIRLEGHSLTPEDGYISRDIHLLQICSGIDENAVGACAELVFAPIDEMFPDDAPLLPSGFRIIPLDSKPDTATNRTLDLTSSLEVGTSTNQGAGDTSSGSTRSVLTIAFQFPFENSLQENVATMARQYVRSVISSVQRVAMAISPSGLSPTVGPKLSAGSPEALTLAHWICQSYSYHMGTELLRTSTAGDETVLKHLWHHQDAILCCSFKSLPVLIFANQAGLDMLETTLVALQDVTLDKIFDESGRKTLCADFSKILQQGFACLPAGMCMSTMGRHVSYDQAVAWKVFAADETTVHCLAFTFVNWSFV*

Click here to download the sequence:
Link to NCBI Protein BLAST