Transcript Information: R_Transcript_426985.p1


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41960829780963
Replicate 20.12066839319712
Replicate 30.26329583443853
Condition 2: 8 Hour
Replicate 10.14072336176578
Replicate 20.38553244553768
Replicate 30.31295880379977
Condition 3: 24 Hour
Replicate 10.13194142084887
Replicate 20.3802630843203
Replicate 30.25158281249307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_426985.p1 GENE.R_Transcript_426985~~R_Transcript_426985.p1 ORF type:internal len:174 (-),score=24.10,SURNod19|PF07712.8|9.8e-82 R_Transcript_426985:2-520(-)
CTTGTAGAAACATACATGCACCATTGGGCAGTTTTCAGATACTATGTCAAACCAGAAAATCATTCAGATTTGATACTTGTCAGGAACAGTGGAGTTTGCCCTGATAATCTTCTTGGGCAGTATTTTGGGATGGGTTCTGAAACCCGGAAAACTGACACACATGTTCCCGACCCTTATGCCATCGAAGTAGGAAACCCTTCCGAAGTTCCACAAGGATATGCAGAAGGATGGCTTCTTAACGTTCATGCAATTGATCTACGTGGTGTGGTGAACAGGACAGGTTGCACAGAGTGCAGGTGTAGCTTTTACAATGTAACCAAAGACGAGACTGGAAAGTCCTTGAAGCCCGGCTATGAAGGGGGATTTCACTGTTGCTATAATCAGACTCATTGTATGGTAAAAGAAGGTGTTGCCCTCTTATCGAGGAGGGTATACTTGAGGTACACTGTCAAGTGGGTTGATTGGGATCAATCTGTGCTGCCTGTCAGGTTTTACATCTTGGATGTTACTGACACCCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_426985.p1 GENE.R_Transcript_426985~~R_Transcript_426985.p1 ORF type:internal len:174 (-),score=24.10,SURNod19|PF07712.8|9.8e-82 R_Transcript_426985:2-520(-)
LVETYMHHWAVFRYYVKPENHSDLILVRNSGVCPDNLLGQYFGMGSETRKTDTHVPDPYAIEVGNPSEVPQGYAEGWLLNVHAIDLRGVVNRTGCTECRCSFYNVTKDETGKSLKPGYEGGFHCCYNQTHCMVKEGVALLSRRVYLRYTVKWVDWDQSVLPVRFYILDVTDTP

Click here to download the sequence:
Link to NCBI Protein BLAST