Transcript Information: R_Transcript_42768.p1


Annotated TAIR IDAT5G43710.1
Annotated Gene NameGlycosyl hydrolase family 47 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17552252-17556523 | Reverse length=624
E-Value2.1e-321
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9577664556202
Replicate 24.4344186479221
Replicate 34.9845061009228
Condition 2: 8 Hour
Replicate 14.8188182216179
Replicate 27.5848111205301
Replicate 37.9576660959777
Condition 3: 24 Hour
Replicate 15.4731412430847
Replicate 24.6933590919149
Replicate 35.3581101073525


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42768.p1 GENE.R_Transcript_42768~~R_Transcript_42768.p1 ORF type:complete len:625 (+),score=97.99,Glyco_hydro_47|PF01532.16|6.9e-114 R_Transcript_42768:199-2073(+)
ATGAAAAGATCAGTTACGGGGTTCAAGCTATGGTTTTTGGTTTTGATATCAATAGGCTGCATGTGCATCGGATCTCTTGCAAAAAGCGTTACCCCAGATGAAGCTAGAGAGCTTAGAGATGAGGTTCGTGAGATGTTCTATCATGCATTTAATGGGTACATGAAGAATGCTTTTCCACGTGATGAGTTAAGACCCTTATCTTGTGATGGAGAAGATACACTTGGCGGTTATGCCTTAACTCTGGTTGACTCGCTAGACACTCTGGCGTTGCTGGGTGATAAAGAACGTTTTGCTACTTCTGTTGAATGGATAGGGAAAAACCTGCGATTTGACATTAATAAAACAGTGTCAGTCTTTGAAACAACTATCCGGGTCCTTGGAGGTTTGCTCTCTGCCCACCTTATTGCAAGTGATTATGCTACGGGCATGAAAATTCCATCATATGACAACGAATTACTTCATTTTGCTGAGGATCTTGGCCATAGACTCCTTCCTGCCTTTGACACTCCTACAGGGATTCCATTTGGATCTGTTAATTTAAGGCATGGAGTAGACGAAAATGAAAGTAAGATAACATCAACTGCTGGTGGTGGGACTTTGACTTTAGAATTCGGGATCCTAAGCCGTTTAGCAAATAATCCGGTTTTTGAGCAAGTCACGAAGAATGCAGTTCGTGGATTGTGGGCCCGCCGTTCTAATATCAACTTAGTAGGAGCCCACATTAATGTCTTCACGGGTGAATGGACACAAAAGGATGCTGGAATTGGGACAAGTATTGACTCATTCTATGAGTATCTTCTGAAGGCTTTTTTATTGTTTGGAGATGAGGAGTATTTATTCATTTTTCAAGAAGCTTATGCGGCTGCAATGCGCTATCTTTTCACTGATCCCTGGTATGTAGAGGTGAATATGGACTCTGCAGCTATTGTGTGGCCATTATTCAATAGTTTGCAAGCATTCTGGCCAGGCTTACAGGTATTAGCTGGGGATGTTGAGCCAGCTATTCGTACACATGCTGCCTTCTACAGTGTTTGGAAAAGATATGGCTTCACGCCGGAGGGCTTTAATCTTGCTACTCTTAACGTTCAGCCTGGGCAGAAAAGTTATCCACTTCGGCCAGAGTTAGTTGAAAGCACCTATTGGTTGTACAAAGCCACCAGAGATCCCAGGTATCTGGATGTAGGCCGTGATATAGTTGCCAGCTTGCAATATGGGGCTCGTTGCCCCTGTGGATATTGTCATATAACAGATGTCGAGGATCACAAAAGAGAAGATCACATGGAGAGCTTTTTCCTAGCTGAAACTGTTAAATATTTGTGGCTGCTATTTGATTTAGCTGTTGGTCCTGATAACCTTGTTGAAAATGGACCATACAAGTATATTTTTAGCACTGAAGGCCATCTACTCCCAGCAACCCCTCAATTATCTCTAGTACGTGAACACTGTTCATATTATGGTGCATACTGTAATAATAATACAAGTAGCTTGAGACAGGAATCCCACTCTCCTGATGTATTTAGGAAGTCTGAAGAGGCAAATGGTAGTAGATTCGACGGAAGCTGGGGCCTCAAGGAATTGTTGTCTTCCTCATCTGCTAGAAATGGTAGTTCTGGCTCAGGGTCAATCAAGGGGATTTGCCGAGGTCTAACTCATGGACAGAAATTTGGCATATCATATTTTGAACCCCAGCCTAAGGCTGAGGAAGCTGGCTCTGCCGATCTAGGGACAGGTTCTCATACGGGTAGCACTGTGATGGTTCTTTCTGAAACTGCTGTAAACATGGTACCCAAGTCAACAAATGCTGACAGGTCTGATGAAGGAAACAGCAACAAAAGTGAAGTGGAAAGTGAGTCATCTGAATCATCAAAGGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42768.p1 GENE.R_Transcript_42768~~R_Transcript_42768.p1 ORF type:complete len:625 (+),score=97.99,Glyco_hydro_47|PF01532.16|6.9e-114 R_Transcript_42768:199-2073(+)
MKRSVTGFKLWFLVLISIGCMCIGSLAKSVTPDEARELRDEVREMFYHAFNGYMKNAFPRDELRPLSCDGEDTLGGYALTLVDSLDTLALLGDKERFATSVEWIGKNLRFDINKTVSVFETTIRVLGGLLSAHLIASDYATGMKIPSYDNELLHFAEDLGHRLLPAFDTPTGIPFGSVNLRHGVDENESKITSTAGGGTLTLEFGILSRLANNPVFEQVTKNAVRGLWARRSNINLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAFLLFGDEEYLFIFQEAYAAAMRYLFTDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDVEPAIRTHAAFYSVWKRYGFTPEGFNLATLNVQPGQKSYPLRPELVESTYWLYKATRDPRYLDVGRDIVASLQYGARCPCGYCHITDVEDHKREDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQLSLVREHCSYYGAYCNNNTSSLRQESHSPDVFRKSEEANGSRFDGSWGLKELLSSSSARNGSSGSGSIKGICRGLTHGQKFGISYFEPQPKAEEAGSADLGTGSHTGSTVMVLSETAVNMVPKSTNADRSDEGNSNKSEVESESSESSKG*

Click here to download the sequence:
Link to NCBI Protein BLAST