Transcript Information: R_Transcript_42776.p2


Annotated TAIR IDAT5G43710.1
Annotated Gene NameGlycosyl hydrolase family 47 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17552252-17556523 | Reverse length=624
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0652618172013
Replicate 25.3711466181228
Replicate 35.5935056920837
Condition 2: 8 Hour
Replicate 16.5485452765888
Replicate 210.530415285675
Replicate 36.4374898130442
Condition 3: 24 Hour
Replicate 17.7415861581793
Replicate 25.770271221372
Replicate 35.726434365758


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42776.p2 GENE.R_Transcript_42776~~R_Transcript_42776.p2 ORF type:complete len:172 (+),score=30.54 R_Transcript_42776:1490-2005(+)
ATGATGTACATCTGTGAGCCGAGGTATATTTTTAGCACTGAGGGCCATCTACTCCCAGCAACCCCTCAATTCTCTCTAGTACGTGAACACTGCTTATATTATGGTGCATACTGTAATAATAATACAAGTAGCTTGAGACAGGAATCCCACTCTCCTGATGTATTTAGGAAGTCTGAAGAGGCAAATGGTAGTAGATTCGACGGAAGCTGGGGCCTCAAGGAATTGTTGTCTTCCTCATCTGCTAGAAATGGTAGTTCTGGCTCAGGGTCAATCAAGGGGATTTGCCGAGGTCTAACTCATGGACAGAAATTTGGCATATCATATTTTGAACCCCAGCCTAAGGCTGAGGAAGCTGGCTCTGCCGATCAAAGGGCAGGGTCTCATATGGGTAACACTGAGATGGTTCTTTCTGAAACTCCTGTATACATGGTACCCAAGGCAACAAATGCTGACAGGTCAGATGAAGGAAAAAACAACAAAAGTGAAGTGGAAAGTCAGTCATCTGAATCATCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42776.p2 GENE.R_Transcript_42776~~R_Transcript_42776.p2 ORF type:complete len:172 (+),score=30.54 R_Transcript_42776:1490-2005(+)
MMYICEPRYIFSTEGHLLPATPQFSLVREHCLYYGAYCNNNTSSLRQESHSPDVFRKSEEANGSRFDGSWGLKELLSSSSARNGSSGSGSIKGICRGLTHGQKFGISYFEPQPKAEEAGSADQRAGSHMGNTEMVLSETPVYMVPKATNADRSDEGKNNKSEVESQSSESS*

Click here to download the sequence:
Link to NCBI Protein BLAST