Transcript Information: R_Transcript_42793.p1


Annotated TAIR IDAT5G67240.1
Annotated Gene Namesmall RNA degrading nuclease 3
Annotated Gene Symbol(s)SDN3
Annotation TypeHomolog
Chromosome Positionchr5:26824454-26828098 | Reverse length=782
E-Value7E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3389562722046
Replicate 21.920393330759
Replicate 32.6538293556518
Condition 2: 8 Hour
Replicate 11.9409527092329
Replicate 21.4998152454454
Replicate 32.8776943666467
Condition 3: 24 Hour
Replicate 13.4996657359305
Replicate 21.2103495732634
Replicate 33.7369251904459


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42793.p1 GENE.R_Transcript_42793~~R_Transcript_42793.p1 ORF type:complete len:164 (+),score=34.16 R_Transcript_42793:283-774(+)
ATGGATGAGAAGCTCGCCTCCGCAGGGAAAGACGCCCTTGTTCAAATTGTCAAGTTGGCACAGAAGCGGGGGATGGAGGGTGATAAAGGAGGATGGAAAGAATTTCTAAAAGTTTATGATAAAAAGTTTGGTGCTAGCATGAGCGACCCAGCTAGGAGGAACCCTGAAGTATTGCTTGCTTTTCTATGTACATTCAAGGAAGAGGATGATTTAAAATATTTTGCAAAAGTTCTGAAGTGCCACTCAAATCGTGAGCTGGTGAAGCAATATGTGAAGTCTGAAGATGCTACATCTCTTGAACAGAGGTTGGTCCGTTTGACCCTTGACCACCCACAATATCCAATTGAGTATTCATTTCCATCACACGAGGAGGTGTGTTTGAATCATTCTATTCTTGTTTTGCTATCACATATATTGATGACTAGAGATTGGAGATGGATTTTTTTATGGTTGTTATTGCATGAATCATCCCTCCATTCCATCCTTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42793.p1 GENE.R_Transcript_42793~~R_Transcript_42793.p1 ORF type:complete len:164 (+),score=34.16 R_Transcript_42793:283-774(+)
MDEKLASAGKDALVQIVKLAQKRGMEGDKGGWKEFLKVYDKKFGASMSDPARRNPEVLLAFLCTFKEEDDLKYFAKVLKCHSNRELVKQYVKSEDATSLEQRLVRLTLDHPQYPIEYSFPSHEEVCLNHSILVLLSHILMTRDWRWIFLWLLLHESSLHSILQ*

Click here to download the sequence:
Link to NCBI Protein BLAST