Transcript Information: R_Transcript_4280.p1


Annotated TAIR IDAT5G39040.1
Annotated Gene Nametransporter associated with antigen processing protein 2
Annotated Gene Symbol(s)ALS1, ATTAP2, TAP2
Annotation TypeOrtholog
Chromosome Positionchr5:15625660-15629621 | Forward length=644
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.215709714502
Replicate 27.1615288241637
Replicate 39.730924188133
Condition 2: 8 Hour
Replicate 110.13600921072
Replicate 28.1469879576413
Replicate 310.637688084506
Condition 3: 24 Hour
Replicate 113.98824533409
Replicate 211.865387341132
Replicate 315.100819512666


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4280.p1 GENE.R_Transcript_4280~~R_Transcript_4280.p1 ORF type:complete len:645 (+),score=151.47,ABC_membrane|PF00664.19|1.9e-59,ABC_tran|PF00005.23|3.2e-35 R_Transcript_4280:382-2316(+)
ATGAATTTTGGAGGGCGTGGTGGTGGTGGTGGTTATGGTCATGGTCATGGTGGTGGTGGAGATAGAACTCCTCTTTTGTCAAGACATGCTGGTGGAAAGAGGAATGATGTTTCAGCAGAAGGTGGATCAGATCTAGAGCGCGGGGATTTACCAGCTGCAAATGTGGGCTTCTGTAGGGTTCTTTCCCTTGCAAAGCCTGAAGCAGGAAGACTGGTGATTGCCACAGTTGCTTTGTTGATTGCAGCCACATCAAACATTTTGATTCCAAAGTTTGGCGGAAAAATAATTGATATTGTATCGAGTGATATCAGTACACCTGAGCAGAAAGCTGAAGCCATAGAAGCAGTCAAGAGCACCATACTGGAGATCATTCTAATTATTGTCGTGGGTTCGGTGACAACAGGTCTTCGTGCCTGGCTGTTTAATTCTGCAAGTGAAAGGGTCGTTGCAAGACTAAGAAAGAACTTATTCTCTCATCTGGTTCACCAGGAAATAGCCTTTTATGATGTAACTCGAACTGGAGAACTCTTGAGTAGGCTTTCTGAAGATACCCAGATCATAAAAAATGCTGCCACTACCAATCTTTCTGAAGCGCTGAGAAATTTAGCAACAGCATTTATTGGTCTTGGCTTCATGTTTGCCACATCATGGAAGCTAACTTTGTTGTCTTTGGTTGTTGTGCCTCCAATTTCTGTTGGTGTACGTAAATTTGGTCGCTTCCTTCGTGACCTTGCGCACAAGACTCAGGCAGCAGCTGCTGCAGCTTCTTCAATAGCTGAGGACTCTTTTGGTGCTATTCGGACAGTAAGGTCATTTGCCCAAGAAAAATATGAGATTCAACGCTACTCTGATCAAGTAGAGGAGACACTATACTTGGGACTTAAACAAGCTAAAGTTTCAGGAATGTTCTTTGGAGGACTAAATGCAGCATCTACCCTCTCGGTTATCGTGGTGGTGATATATGGTGCTATTCTAACAATCAATGGTGCTGGTGGCATGACACCTGGTGCTCTCACATCCTTCATTCTGTATAGCCTTACAGTTGGATCATCTATATCTGGACTTTCTGGATTATACACAGTAGCAATGAAAGCTGCAGGAGCTAGTAGACGTGTGTTCCAACTTCTAGACCGTAAATCGTCCATGGAGAAATCAGGATCCAAGTGTCCATTGAGTGATCAAGATGCAGAAGTGGAGTTGGATGATGTCTGGTTTGCATATCCCTCACGGCCAAACGATATGGTGCTCAAGGGAATTAACTTAAAATTGGAACCCGGTTCAAAGGTCGCTCTTGTTGGTCCTAGTGGTGGCGGAAAAACAACAATAGCAAACTTAATTGAGAGATTTTATGATCCTACCAAAGGGAAGATCTTGCTTGCTGGGGTACCTTTGGTAGAAATATCTCACACACATCTCCATAGCAAGATCAGCATAGTAAGCCAGGAGCCAACTCTTTTCAATTGCTCCATAGAAGAGAACATTGCTTATGGTCTAAGTGGCAAAGCCAGCAGTGAAGATATTGAGAATGCTGCTAAAATGGCAAATGCTCATGATTTTATATCCAAGTTTCCTGAGAAATATCAAACTCATGTTGGAGAAAGGGGAGTTCGGCTTTCAGGAGGTCAGAAACAGCGAATAGCAATTGCTCGAGCTCTGCTGATGAATCCTAGAGTACTACTTTTGGATGAGGCCACAAGCGCTCTTGATGCTGAGAGCGAATACCTAGTACAGGATGCCATGGACCACTTGATGAATGGAAGAACCGTGTTAGTGATAGCACATAGATTGTCAACTGTTAAAAGTGCAAATACAGTAGCCGTCATCTCTGATGGTCAGGTGGTGGAAAGTGGCACTCATGAAGAGCTTTTAGAGAAGGATGGAATCTACACTGCATTGGTGAGGAGGCAATTGCAAGGACCCAGAGCCGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4280.p1 GENE.R_Transcript_4280~~R_Transcript_4280.p1 ORF type:complete len:645 (+),score=151.47,ABC_membrane|PF00664.19|1.9e-59,ABC_tran|PF00005.23|3.2e-35 R_Transcript_4280:382-2316(+)
MNFGGRGGGGGYGHGHGGGGDRTPLLSRHAGGKRNDVSAEGGSDLERGDLPAANVGFCRVLSLAKPEAGRLVIATVALLIAATSNILIPKFGGKIIDIVSSDISTPEQKAEAIEAVKSTILEIILIIVVGSVTTGLRAWLFNSASERVVARLRKNLFSHLVHQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLATAFIGLGFMFATSWKLTLLSLVVVPPISVGVRKFGRFLRDLAHKTQAAAAAASSIAEDSFGAIRTVRSFAQEKYEIQRYSDQVEETLYLGLKQAKVSGMFFGGLNAASTLSVIVVVIYGAILTINGAGGMTPGALTSFILYSLTVGSSISGLSGLYTVAMKAAGASRRVFQLLDRKSSMEKSGSKCPLSDQDAEVELDDVWFAYPSRPNDMVLKGINLKLEPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLAGVPLVEISHTHLHSKISIVSQEPTLFNCSIEENIAYGLSGKASSEDIENAAKMANAHDFISKFPEKYQTHVGERGVRLSGGQKQRIAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDHLMNGRTVLVIAHRLSTVKSANTVAVISDGQVVESGTHEELLEKDGIYTALVRRQLQGPRAEN*

Click here to download the sequence:
Link to NCBI Protein BLAST