Transcript Information: R_Transcript_428057.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78601267269124
Replicate 20.30138230262629
Replicate 30.54800807646298
Condition 2: 8 Hour
Replicate 10.35147174565424
Replicate 20.32096959580649
Replicate 30.43424905790399
Condition 3: 24 Hour
Replicate 10.43938387038668
Replicate 20.31658266350111
Replicate 30.41890343898368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_428057.p1 GENE.R_Transcript_428057~~R_Transcript_428057.p1 ORF type:complete len:209 (+),score=15.53,RVT_1|PF00078.23|7.5e-11 R_Transcript_428057:203-829(+)
ATGAGACAAGGCGATCCTCTCTGGCCCTATCTCTTTGTCTTGTGTATGGAGAGATTCTCCCACGTAATCGAAGCGGCAGTGAAATGTGGTCATTGGAAGTCTATTACTTTTTGTCGTAATGGACCTACACTATCACATTTATTTTTCGCTGATGACCTTGTCTTATTCAGCGAGGCTTCGGTTGAACAAACCCACATCATCACACAGTGCTTGGATAATTTCTGCATGGCGTATGGGCAAAGAGTGAGCCACCATAAGTCTCGTATCCTCTTATCAAAAGGAGCTCCACCAGGACTAGGGGATGTTGTTAGTCAAGCTTTGAATATCCCACTTACGCATGACTTGGGTAAATACCTTAGAATACCCACTATCCAAGGGAGGGTCACTAAAGCCATGTACAAGCATGTTATTGATCCAGTGAATGATCGCCTCACTGGCTGGAGGGCCAAATACCTCTTACTAGCTGGGAGGATCACCTTAGCCCAAGCAGCCCTGGCATGCTTGCCGTACTACACCATGCAGACAACTATGCTCCCTCGGTCTATATACGATGAAGTGGATAAGAAGTGTCGGGCTTTCATCTGGGGATCGACTATTGAGGCCAGAATAATTCATCTTGCTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_428057.p1 GENE.R_Transcript_428057~~R_Transcript_428057.p1 ORF type:complete len:209 (+),score=15.53,RVT_1|PF00078.23|7.5e-11 R_Transcript_428057:203-829(+)
MRQGDPLWPYLFVLCMERFSHVIEAAVKCGHWKSITFCRNGPTLSHLFFADDLVLFSEASVEQTHIITQCLDNFCMAYGQRVSHHKSRILLSKGAPPGLGDVVSQALNIPLTHDLGKYLRIPTIQGRVTKAMYKHVIDPVNDRLTGWRAKYLLLAGRITLAQAALACLPYYTMQTTMLPRSIYDEVDKKCRAFIWGSTIEARIIHLAC*

Click here to download the sequence:
Link to NCBI Protein BLAST